C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calnexin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020368 Canx 10090 - 11:50293961-50325673 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020637 Canx-001 50294467-50325673 protein_coding
  ENSMUST00000146979 Canx-003 50296199-50299378 processed_transcript
  ENSMUST00000153068 Canx-002 50297364-50298319 processed_transcript
  ENSMUST00000155801 Canx-004 50298838-50300990 processed_transcript
  ENSMUST00000179865 Canx-201 50293961-50325673 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020637ENSMUST00000146979
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020637 43.912±11.10 40.082±5.19 77.481±7.56 38.403±13.46 36.318±4.20 41.210±7.08 49.572±4.61 76.697±6.19 75.944±10.12 57.396±2.45 12.500±2.27 65.759±14.36 118.274±52.04 36.143±4.33
ENSMUST00000146979 N/A N/A N/A 120.962±0.00 N/A N/A N/A N/A 117.732±0.00 N/A N/A 348.501±0.00 311.481±101.18 305.489±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F2 CIL_0004F2_0002 CGP 11:50255634-50325673

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001948 IEA glycoprotein binding
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0005790 IEA smooth endoplasmic reticulum
GO:0005791 IEA rough endoplasmic reticulum
GO:0005840 IEA ribosome
GO:0007568 IEA aging
GO:0016020 IDA membrane
GO:0016021 IDA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0030424 IEA axon
GO:0032839 IEA dendrite cytoplasm
GO:0034185 IEA apolipoprotein binding
GO:0035255 IEA ionotropic glutamate receptor binding
GO:0043025 IEA neuronal cell body
GO:0043197 IEA dendritic spine
GO:0043234 IEA protein complex
GO:0044233 IEA ER-mitochondrion membrane contact site
GO:0044822 IEA poly(A) RNA binding
GO:0048488 IMP synaptic vesicle endocytosis
GO:0061077 IEA chaperone-mediated protein folding
GO:0070062 IEA extracellular vesicular exosome
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane
GO:0072583 IMP clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037488 canx calnexin protein_coding Danio_rerio
ENSG00000127022 CANX calnexin protein_coding Homo_sapiens

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