C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700049G17 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000070709 1700049G17Rik 10090 - 7:27907392-27929460 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000098639 1700049G17Rik-001 27907392-27929430 protein_coding
  ENSMUST00000129341 1700049G17Rik-005 27911996-27927511 protein_coding
  ENSMUST00000137668 1700049G17Rik-002 27925753-27929460 processed_transcript
  ENSMUST00000138583 1700049G17Rik-003 27924033-27929430 processed_transcript
  ENSMUST00000145674 1700049G17Rik-006 27920159-27927458 retained_intron
  ENSMUST00000152330 1700049G17Rik-004 27926007-27928022 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000098639ENSMUST00000129341ENSMUST00000137668ENSMUST00000138583ENSMUST00000145674ENSMUST00000152330
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000098639 0.533±0.17 0.260±0.08 1.561±0.13 1.749±0.09 0.409±0.20 0.217±0.13 0.092±0.03 0.431±0.04 0.173±0.08 0.349±0.04 0.371±0.28 0.194±0.18 N/A
ENSMUST00000129341 N/A N/A N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A 1.354±0.00 0.316±0.00 N/A
ENSMUST00000137668 1.150±0.17 0.496±0.23 N/A N/A 0.988±0.53 0.558±0.33 0.399±0.00 0.798±0.09 0.279±0.03 0.603±0.00 0.654±0.48 0.787±0.00 N/A
ENSMUST00000138583 N/A 0.467±0.00 N/A 0.609±0.00 N/A 0.279±0.14 N/A 0.412±0.00 0.285±0.07 N/A 1.318±0.90 1.010±0.39 N/A
ENSMUST00000145674 0.980±0.03 0.976±0.04 N/A N/A 0.942±0.37 0.306±0.11 0.611±0.00 0.809±0.30 0.149±0.00 0.855±0.16 0.615±0.28 N/A N/A
ENSMUST00000152330 N/A 0.157±0.00 N/A N/A 0.890±0.00 0.217±0.00 0.322±0.00 N/A 0.075±0.00 N/A 0.406±0.15 N/A 18.150±7.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UL CIL_0003UL_0007 CGP 7:27907392-27975368

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074922 zgc:174649 zgc:174649 protein_coding Danio_rerio
ENSDARG00000075470 zgc:110238 zgc:110238 protein_coding Danio_rerio
ENSDARG00000075834 si:dkey-182i3.8 si:dkey-182i3.8 protein_coding Danio_rerio
ENSDARG00000086182 si:dkey-54f18.1 si:dkey-54f18.1 protein_coding Danio_rerio
ENSDARG00000086278 CABZ01050664.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086368 BX663505.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086510 si:ch211-207e19.14 si:ch211-207e19.14 protein_coding Danio_rerio
ENSDARG00000086720 zgc:173603 zgc:173603 protein_coding Danio_rerio
ENSDARG00000086845 CABZ01021430.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000086975 CR812792.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087249 si:dkey-7i4.17 si:dkey-7i4.17 protein_coding Danio_rerio
ENSDARG00000087320 CABZ01017734.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087355 BX294653.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087700 si:ch211-229l10.12 si:ch211-229l10.12 protein_coding Danio_rerio
ENSDARG00000087824 BX324179.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000087864 BX511066.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000088378 si:dkeyp-4f2.4 si:dkeyp-4f2.4 protein_coding Danio_rerio
ENSDARG00000089186 CR388390.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089344 BX640461.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089363 CABZ01002718.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000089587 CR450785.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090043 CABZ01054392.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090377 CABZ01003344.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090400 CR388363.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090420 BX511078.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090979 si:dkey-78o7.1 si:dkey-78o7.1 protein_coding Danio_rerio
ENSDARG00000091284 si:dkey-78k22.1 si:dkey-78k22.1 protein_coding Danio_rerio
ENSDARG00000091364 si:dkey-77p23.3 si:dkey-77p23.3 protein_coding Danio_rerio
ENSDARG00000091524 si:ch211-162i8.3 si:ch211-162i8.3 protein_coding Danio_rerio
ENSDARG00000091688 si:dkey-54f18.1 si:dkey-54f18.1 protein_coding Danio_rerio
ENSDARG00000091793 CABZ01071911.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092000 si:ch211-286l10.1 si:ch211-286l10.1 protein_coding Danio_rerio
ENSDARG00000092215 BX901907.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092244 BX005085.4 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092268 CT573263.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000092435 BX640584.2 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000093143 si:dkey-77f5.5 si:dkey-77f5.5 protein_coding Danio_rerio
ENSDARG00000093500 si:ch211-120c15.2 si:ch211-120c15.2 protein_coding Danio_rerio
ENSDARG00000094175 si:dkey-29p23.3 si:dkey-29p23.3 protein_coding Danio_rerio
ENSDARG00000094313 CT027609.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000094430 si:dkey-238o14.5 si:dkey-238o14.5 protein_coding Danio_rerio
ENSDARG00000094459 si:dkey-16p19.10 si:dkey-16p19.10 protein_coding Danio_rerio
ENSDARG00000094872 CR356223.5 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000095440 si:dkeyp-53e4.2 si:dkeyp-53e4.2 protein_coding Danio_rerio
ENSDARG00000095708 si:dkey-77f5.16 si:dkey-77f5.16 protein_coding Danio_rerio
ENSDARG00000096123 si:dkey-14o6.4 si:dkey-14o6.4 protein_coding Danio_rerio
ENSDARG00000096171 si:dkey-9i5.4 si:dkey-9i5.4 protein_coding Danio_rerio
ENSG00000128000 ZNF780B zinc finger protein 780B protein_coding Homo_sapiens

Loading