C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CDC42 effector protein (Rho GTPase binding) 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128283 CDC42EP1 9606 + 22:37560447-37569405 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000249014 CDC42EP1-001 37560447-37569405 protein_coding
  ENST00000415670 CDC42EP1-004 37563654-37566530 protein_coding
  ENST00000430687 CDC42EP1-002 37560480-37566559 protein_coding
  ENST00000434728 CDC42EP1-003 37564406-37566495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000249014ENST00000415670ENST00000434728
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000249014 39.128±0.00 29.941±0.00 43.151±0.00 27.061±25.39 17.841±16.71 11.276±0.00 9.072±6.41 16.934±16.61 55.049±0.00 2.594±2.55 44.462±25.87 62.050±17.33 23.080±15.13
ENST00000415670 N/A N/A N/A N/A N/A N/A 3.098±0.00 N/A N/A N/A N/A N/A N/A
ENST00000434728 N/A N/A N/A 1.474±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040G CIL_00040G_0001 CGP 22:37490362-37569405
CIL_00040F CIL_00040F_0001 CGP 22:37560447-37582616

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0007266 IEA Rho protein signal transduction
GO:0008360 IDA regulation of cell shape
GO:0015629 IDA actin cytoskeleton
GO:0031274 IDA positive regulation of pseudopodium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077792 CDC42EP1 (1 of 2) CDC42 effector protein (Rho GTPase binding) 1 protein_coding Danio_rerio
ENSDARG00000079549 CDC42EP1 (2 of 2) CDC42 effector protein (Rho GTPase binding) 1 protein_coding Danio_rerio
ENSMUSG00000049521 Cdc42ep1 CDC42 effector protein (Rho GTPase binding) 1 protein_coding Mus_musculus

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