C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 effector protein (Rho GTPase binding) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000249014 CDC42EP1-001 ENSG00000128283 9606 + 22:37560447-37569405 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000249014
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000249014 39.128±0.00 29.941±0.00 43.151±0.00 27.061±25.39 17.841±16.71 11.276±0.00 9.072±6.41 16.934±16.61 55.049±0.00 2.594±2.55 44.462±25.87 62.050±17.33 23.080±15.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040G CIL_00040G_0001 CGP 22:37490362-37569405
CIL_00040F CIL_00040F_0001 CGP 22:37560447-37582616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0007266 IEA Rho protein signal transduction
GO:0008360 IDA regulation of cell shape
GO:0015629 IDA actin cytoskeleton
GO:0031274 IDA positive regulation of pseudopodium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059619 Cdc42ep1-201 protein_coding Mus_musculus 0 573
ENSDART00000111036 CDC42EP1 (2 of 2)-201 protein_coding Danio_rerio 6e-23 113
ENSDART00000152844 CDC42EP1 (2 of 2)-001 protein_coding Danio_rerio 6e-23 113
ENSMUST00000153453 Cdc42ep4-003 protein_coding Mus_musculus 3e-16 92
ENSMUST00000131488 Cdc42ep4-004 protein_coding Mus_musculus 3e-16 92
ENSMUST00000053536 Cdc42ep4-001 protein_coding Mus_musculus 3e-16 92
ENSMUST00000106616 Cdc42ep4-002 protein_coding Mus_musculus 3e-16 92

Loading