C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: isovaleryl-CoA dehydrogenase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000128928 IVD 9606 + 15:40405795-40435947 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000466756 IVD-008 40416167-40424473 protein_coding
  ENST00000473112 IVD-006 40407946-40435556 protein_coding
  ENST00000479013 IVD-002 40405795-40421299 protein_coding
  ENST00000481262 IVD-010 40410736-40435765 nonsense_mediated_decay
  ENST00000484250 IVD-005 40410719-40413178 retained_intron
  ENST00000487418 IVD-001 40405795-40418767 protein_coding
  ENST00000491554 IVD-009 40411608-40435947 protein_coding
  ENST00000497252 IVD-007 40412612-40418175 processed_transcript
  ENST00000497816 IVD-003 40415146-40419157 retained_intron
  ENST00000558610 IVD-013 40406074-40411690 protein_coding
  ENST00000559575 IVD-012 40416155-40419373 protein_coding
  ENST00000560660 IVD-011 40414406-40415461 retained_intron
  ENST00000610693 IVD-004 40405795-40411351 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000473112ENST00000479013ENST00000484250ENST00000487418ENST00000491554ENST00000497816ENST00000560660ENST00000610693
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000473112 N/A 6.230±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479013 N/A N/A N/A 0.385±0.00 7.023±0.00 N/A 23.470±0.00 N/A 1.080±0.35 4.423±0.00 N/A N/A
ENST00000484250 N/A N/A N/A 4.268±0.00 5.284±0.00 N/A 3.543±0.00 N/A N/A 4.681±0.00 N/A N/A
ENST00000487418 2.119±0.00 2.476±0.00 1.168±0.00 2.114±0.00 12.253±9.37 19.361±0.00 0.935±0.00 N/A 5.559±0.00 7.849±3.30 6.038±2.29 9.140±0.00
ENST00000491554 N/A N/A N/A 4.894±0.00 N/A N/A N/A 3.830±0.00 N/A N/A N/A N/A
ENST00000497816 N/A N/A N/A N/A N/A N/A N/A N/A 2.275±0.00 N/A N/A 6.186±0.00
ENST00000560660 N/A N/A N/A N/A N/A N/A N/A 3.255±0.00 N/A N/A N/A N/A
ENST00000610693 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.610±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070I CIL_00070I_0001 CGP 15:40382721-40435947
CIL_00070J CIL_00070J_0001 CGP 15:40405795-40468242

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0005739 IEA mitochondrion
GO:0005759 ISS mitochondrial matrix
GO:0006552 ISS leucine catabolic process
GO:0008152 IEA metabolic process
GO:0008470 ISS isovaleryl-CoA dehydrogenase activity
GO:0009083 TAS branched-chain amino acid catabolic process
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0031966 IEA mitochondrial membrane
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042853 ivd isovaleryl Coenzyme A dehydrogenase protein_coding Danio_rerio
ENSMUSG00000027332 Ivd isovaleryl coenzyme A dehydrogenase protein_coding Mus_musculus

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