C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: isovaleryl-CoA dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487418 IVD-001 ENSG00000128928 9606 + 15:40405795-40418767 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000487418
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000487418 2.119±0.00 2.476±0.00 1.168±0.00 2.114±0.00 12.253±9.37 19.361±0.00 0.935±0.00 5.559±0.00 7.849±3.30 6.038±2.29 9.140±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070I CIL_00070I_0001 CGP 15:40382721-40435947
CIL_00070J CIL_00070J_0001 CGP 15:40405795-40468242

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003995 IEA acyl-CoA dehydrogenase activity
GO:0005739 IEA mitochondrion
GO:0005759 ISS mitochondrial matrix
GO:0006552 ISS leucine catabolic process
GO:0008152 IEA metabolic process
GO:0008470 ISS isovaleryl-CoA dehydrogenase activity
GO:0009083 TAS branched-chain amino acid catabolic process
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0031966 IEA mitochondrial membrane
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028807 Ivd-001 protein_coding Mus_musculus 0 1502
ENSMUST00000125766 Ivd-006 processed_transcript Mus_musculus 0 697
ENSMUST00000152191 Ivd-007 processed_transcript Mus_musculus 0 625
ENSMUST00000150162 Ivd-004 processed_transcript Mus_musculus 0 616
ENSMUST00000140282 Ivd-005 retained_intron Mus_musculus 0 427

Loading