Institute of Cardiovascular Regeneration Webtool Repository

Notice (8): Undefined index: CIL_00070I_0001 [APP/View/Region/show.ctp, line 46]Code Context
        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_00070I_0002' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000128928' => 'isovaleryl-CoA dehydrogenase',
		'ENSG00000128944' => 'kinetochore-localized astrin/SPAG5 binding protein',
		'ENSMUSG00000027331' => 'kinetochore-localized astrin/SPAG5 binding',
		'ENSMUSG00000027332' => 'isovaleryl coenzyme A dehydrogenase',
		'ENSMUSG00000086421' => 'predicted gene 14091'
	),
	'gene_name_arr' => array(
		'ENSG00000128928' => 'IVD',
		'ENSG00000128944' => 'KNSTRN',
		'ENSMUSG00000027331' => 'Knstrn',
		'ENSMUSG00000027332' => 'Ivd',
		'ENSMUSG00000086421' => 'Gm14091'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 6 => 'Adrenal',
		(int) 10 => 'Bladder',
		(int) 18 => 'Brain',
		(int) 25 => 'Breast',
		(int) 31 => 'Colon',
		(int) 40 => 'Heart',
		(int) 50 => 'Kidney',
		(int) 59 => 'Liver',
		(int) 73 => 'Lung',
		(int) 81 => 'Muscle',
		(int) 96 => 'Ovary',
		(int) 111 => 'Placenta',
		(int) 125 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 47,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000466756' => array(
			'start' => '40416167',
			'end' => '40424473',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-008'
		),
		'ENST00000473112' => array(
			'start' => '40407946',
			'end' => '40435556',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-006'
		),
		'ENST00000479013' => array(
			'start' => '40405795',
			'end' => '40421299',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-002'
		),
		'ENST00000481262' => array(
			'start' => '40410736',
			'end' => '40435765',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'IVD-010'
		),
		'ENST00000484250' => array(
			'start' => '40410719',
			'end' => '40413178',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'IVD-005'
		),
		'ENST00000487418' => array(
			'start' => '40405795',
			'end' => '40418767',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-001'
		),
		'ENST00000491554' => array(
			'start' => '40411608',
			'end' => '40435947',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-009'
		),
		'ENST00000497252' => array(
			'start' => '40412612',
			'end' => '40418175',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'IVD-007'
		),
		'ENST00000497816' => array(
			'start' => '40415146',
			'end' => '40419157',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'IVD-003'
		),
		'ENST00000558610' => array(
			'start' => '40406074',
			'end' => '40411690',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-013'
		),
		'ENST00000559575' => array(
			'start' => '40416155',
			'end' => '40419373',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-012'
		),
		'ENST00000560660' => array(
			'start' => '40414406',
			'end' => '40415461',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'IVD-011'
		),
		'ENST00000610693' => array(
			'start' => '40405795',
			'end' => '40411351',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-004'
		),
		'ENST00000249776' => array(
			'start' => '40382721',
			'end' => '40394245',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'KNSTRN-001'
		),
		'ENST00000416151' => array(
			'start' => '40382721',
			'end' => '40394154',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'KNSTRN-005'
		),
		'ENST00000448395' => array(
			'start' => '40382836',
			'end' => '40394172',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'KNSTRN-003'
		),
		'ENST00000557920' => array(
			'start' => '40382996',
			'end' => '40389929',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'KNSTRN-011'
		),
		'ENST00000559083' => array(
			'start' => '40383255',
			'end' => '40392023',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-014'
		),
		'ENST00000559304' => array(
			'start' => '40382980',
			'end' => '40393618',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-013'
		),
		'ENST00000559591' => array(
			'start' => '40382941',
			'end' => '40384922',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'KNSTRN-008'
		),
		'ENST00000559604' => array(
			'start' => '40382721',
			'end' => '40383438',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'KNSTRN-006'
		),
		'ENST00000560220' => array(
			'start' => '40382976',
			'end' => '40393626',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-007'
		),
		'ENST00000560321' => array(
			'start' => '40382939',
			'end' => '40393677',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-015'
		),
		'ENST00000560673' => array(
			'start' => '40383004',
			'end' => '40386848',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'KNSTRN-010'
		),
		'ENST00000560981' => array(
			'start' => '40382721',
			'end' => '40394172',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-002'
		),
		'ENST00000561169' => array(
			'start' => '40382979',
			'end' => '40394160',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-004'
		),
		'ENST00000561196' => array(
			'start' => '40382976',
			'end' => '40384676',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'KNSTRN-009'
		),
		'ENST00000561367' => array(
			'start' => '40389808',
			'end' => '40392000',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'KNSTRN-012'
		),
		'ENST00000608100' => array(
			'start' => '40382941',
			'end' => '40394246',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'KNSTRN-016'
		),
		'ENSMUST00000028803' => array(
			'start' => '118814254',
			'end' => '118834642',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Knstrn-002'
		),
		'ENSMUST00000110842' => array(
			'start' => '118814233',
			'end' => '118834158',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Knstrn-004'
		),
		'ENSMUST00000123104' => array(
			'start' => '118814296',
			'end' => '118834068',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'Knstrn-006'
		),
		'ENSMUST00000126045' => array(
			'start' => '118814277',
			'end' => '118830969',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Knstrn-005'
		),
		'ENSMUST00000134579' => array(
			'start' => '118814232',
			'end' => '118834249',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'Knstrn-003'
		),
		'ENSMUST00000134661' => array(
			'start' => '118814003',
			'end' => '118837696',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Knstrn-001'
		),
		'ENSMUST00000148877' => array(
			'start' => '118834075',
			'end' => '118853957',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'Knstrn-007'
		),
		'ENSMUST00000176463' => array(
			'start' => '118831583',
			'end' => '118837143',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'Knstrn-009'
		),
		'ENSMUST00000177103' => array(
			'start' => '118814232',
			'end' => '118834181',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'Knstrn-008'
		),
		'ENSMUST00000028807' => array(
			'start' => '118861954',
			'end' => '118882909',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Ivd-001'
		),
		'ENSMUST00000125766' => array(
			'start' => '118874307',
			'end' => '118880579',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Ivd-006'
		),
		'ENSMUST00000126082' => array(
			'start' => '118862028',
			'end' => '118870397',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Ivd-002'
		),
		'ENSMUST00000140282' => array(
			'start' => '118872767',
			'end' => '118874761',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Ivd-005'
		),
		'ENSMUST00000141836' => array(
			'start' => '118871378',
			'end' => '118872277',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Ivd-003'
		),
		'ENSMUST00000150162' => array(
			'start' => '118872303',
			'end' => '118876966',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Ivd-004'
		),
		'ENSMUST00000152191' => array(
			'start' => '118875707',
			'end' => '118881015',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Ivd-007'
		),
		'ENSMUST00000154104' => array(
			'start' => '118876433',
			'end' => '118877900',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Ivd-008'
		),
		'ENSMUST00000133534' => array(
			'start' => '118829874',
			'end' => '118834122',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'Gm14091-001'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_00070I_0002' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_00070I_0002' => array(
		'genes_in_region' => array(
			'ENSMUSG00000027331' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000027332' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000086421' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Liver',
			(int) 8 => 'Muscle',
			(int) 9 => 'Ovary',
			(int) 10 => 'Placenta',
			(int) 11 => 'Testis',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Liver',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Kidney',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Muscle',
			(int) 22 => 'Ovary',
			(int) 23 => 'Placenta',
			(int) 24 => 'Adipose',
			(int) 25 => 'Adrenal',
			(int) 26 => 'Bladder',
			(int) 27 => 'Brain',
			(int) 28 => 'Breast',
			(int) 29 => 'Colon',
			(int) 30 => 'Heart',
			(int) 31 => 'Kidney',
			(int) 32 => 'Liver',
			(int) 33 => 'Lung',
			(int) 34 => 'Muscle',
			(int) 35 => 'Ovary',
			(int) 36 => 'Placenta',
			(int) 37 => 'Testis',
			(int) 38 => 'Liver',
			(int) 39 => 'Muscle',
			(int) 40 => 'Ovary',
			(int) 41 => 'Placenta',
			(int) 42 => 'Testis',
			(int) 43 => 'Adipose',
			(int) 44 => 'Adrenal',
			(int) 45 => 'Bladder',
			(int) 46 => 'Brain',
			(int) 47 => 'Breast',
			(int) 48 => 'Colon',
			(int) 49 => 'Heart',
			(int) 50 => 'Kidney',
			(int) 51 => 'Liver',
			(int) 52 => 'Lung',
			(int) 53 => 'Muscle',
			(int) 54 => 'Ovary',
			(int) 55 => 'Placenta',
			(int) 56 => 'Testis',
			(int) 57 => 'Ovary',
			(int) 58 => 'Adipose',
			(int) 59 => 'Brain',
			(int) 60 => 'Colon',
			(int) 61 => 'Heart',
			(int) 62 => 'Liver',
			(int) 63 => 'Muscle',
			(int) 64 => 'Ovary',
			(int) 65 => 'Placenta',
			(int) 66 => 'Testis',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Muscle',
			(int) 70 => 'Placenta'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000128928' => 'isovaleryl-CoA dehydrogenase',
	'ENSG00000128944' => 'kinetochore-localized astrin/SPAG5 binding protein',
	'ENSMUSG00000027331' => 'kinetochore-localized astrin/SPAG5 binding',
	'ENSMUSG00000027332' => 'isovaleryl coenzyme A dehydrogenase',
	'ENSMUSG00000086421' => 'predicted gene 14091'
)
$gene_name_arr = array(
	'ENSG00000128928' => 'IVD',
	'ENSG00000128944' => 'KNSTRN',
	'ENSMUSG00000027331' => 'Knstrn',
	'ENSMUSG00000027332' => 'Ivd',
	'ENSMUSG00000086421' => 'Gm14091'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_00070I_0001',
			'tax_id' => '9606',
			'chromosome' => '15',
			'seq_start' => '40382721',
			'seq_end' => '40435947',
			'region_length' => '53226',
			'region_type' => 'CGP',
			'el_id' => 'ENSG00000128944-ENSG00000128928'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_00070I_0002',
			'tax_id' => '10090',
			'chromosome' => '2',
			'seq_start' => '118814003',
			'seq_end' => '118882909',
			'region_length' => '68906',
			'region_type' => 'CGP',
			'el_id' => 'ENSMUSG00000027331-ENSMUSG00000027332'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 6 => 'Adrenal',
	(int) 10 => 'Bladder',
	(int) 18 => 'Brain',
	(int) 25 => 'Breast',
	(int) 31 => 'Colon',
	(int) 40 => 'Heart',
	(int) 50 => 'Kidney',
	(int) 59 => 'Liver',
	(int) 73 => 'Lung',
	(int) 81 => 'Muscle',
	(int) 96 => 'Ovary',
	(int) 111 => 'Placenta',
	(int) 125 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 47
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000466756' => array(
		'start' => '40416167',
		'end' => '40424473',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-008'
	),
	'ENST00000473112' => array(
		'start' => '40407946',
		'end' => '40435556',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-006'
	),
	'ENST00000479013' => array(
		'start' => '40405795',
		'end' => '40421299',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-002'
	),
	'ENST00000481262' => array(
		'start' => '40410736',
		'end' => '40435765',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'IVD-010'
	),
	'ENST00000484250' => array(
		'start' => '40410719',
		'end' => '40413178',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'IVD-005'
	),
	'ENST00000487418' => array(
		'start' => '40405795',
		'end' => '40418767',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-001'
	),
	'ENST00000491554' => array(
		'start' => '40411608',
		'end' => '40435947',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-009'
	),
	'ENST00000497252' => array(
		'start' => '40412612',
		'end' => '40418175',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'IVD-007'
	),
	'ENST00000497816' => array(
		'start' => '40415146',
		'end' => '40419157',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'IVD-003'
	),
	'ENST00000558610' => array(
		'start' => '40406074',
		'end' => '40411690',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-013'
	),
	'ENST00000559575' => array(
		'start' => '40416155',
		'end' => '40419373',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-012'
	),
	'ENST00000560660' => array(
		'start' => '40414406',
		'end' => '40415461',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'IVD-011'
	),
	'ENST00000610693' => array(
		'start' => '40405795',
		'end' => '40411351',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-004'
	),
	'ENST00000249776' => array(
		'start' => '40382721',
		'end' => '40394245',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'KNSTRN-001'
	),
	'ENST00000416151' => array(
		'start' => '40382721',
		'end' => '40394154',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'KNSTRN-005'
	),
	'ENST00000448395' => array(
		'start' => '40382836',
		'end' => '40394172',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'KNSTRN-003'
	),
	'ENST00000557920' => array(
		'start' => '40382996',
		'end' => '40389929',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'KNSTRN-011'
	),
	'ENST00000559083' => array(
		'start' => '40383255',
		'end' => '40392023',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-014'
	),
	'ENST00000559304' => array(
		'start' => '40382980',
		'end' => '40393618',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-013'
	),
	'ENST00000559591' => array(
		'start' => '40382941',
		'end' => '40384922',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'KNSTRN-008'
	),
	'ENST00000559604' => array(
		'start' => '40382721',
		'end' => '40383438',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'KNSTRN-006'
	),
	'ENST00000560220' => array(
		'start' => '40382976',
		'end' => '40393626',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-007'
	),
	'ENST00000560321' => array(
		'start' => '40382939',
		'end' => '40393677',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-015'
	),
	'ENST00000560673' => array(
		'start' => '40383004',
		'end' => '40386848',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'KNSTRN-010'
	),
	'ENST00000560981' => array(
		'start' => '40382721',
		'end' => '40394172',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-002'
	),
	'ENST00000561169' => array(
		'start' => '40382979',
		'end' => '40394160',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-004'
	),
	'ENST00000561196' => array(
		'start' => '40382976',
		'end' => '40384676',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'KNSTRN-009'
	),
	'ENST00000561367' => array(
		'start' => '40389808',
		'end' => '40392000',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'KNSTRN-012'
	),
	'ENST00000608100' => array(
		'start' => '40382941',
		'end' => '40394246',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'KNSTRN-016'
	),
	'ENSMUST00000028803' => array(
		'start' => '118814254',
		'end' => '118834642',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Knstrn-002'
	),
	'ENSMUST00000110842' => array(
		'start' => '118814233',
		'end' => '118834158',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Knstrn-004'
	),
	'ENSMUST00000123104' => array(
		'start' => '118814296',
		'end' => '118834068',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'Knstrn-006'
	),
	'ENSMUST00000126045' => array(
		'start' => '118814277',
		'end' => '118830969',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Knstrn-005'
	),
	'ENSMUST00000134579' => array(
		'start' => '118814232',
		'end' => '118834249',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'Knstrn-003'
	),
	'ENSMUST00000134661' => array(
		'start' => '118814003',
		'end' => '118837696',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Knstrn-001'
	),
	'ENSMUST00000148877' => array(
		'start' => '118834075',
		'end' => '118853957',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'Knstrn-007'
	),
	'ENSMUST00000176463' => array(
		'start' => '118831583',
		'end' => '118837143',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'Knstrn-009'
	),
	'ENSMUST00000177103' => array(
		'start' => '118814232',
		'end' => '118834181',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'Knstrn-008'
	),
	'ENSMUST00000028807' => array(
		'start' => '118861954',
		'end' => '118882909',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Ivd-001'
	),
	'ENSMUST00000125766' => array(
		'start' => '118874307',
		'end' => '118880579',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Ivd-006'
	),
	'ENSMUST00000126082' => array(
		'start' => '118862028',
		'end' => '118870397',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Ivd-002'
	),
	'ENSMUST00000140282' => array(
		'start' => '118872767',
		'end' => '118874761',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Ivd-005'
	),
	'ENSMUST00000141836' => array(
		'start' => '118871378',
		'end' => '118872277',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Ivd-003'
	),
	'ENSMUST00000150162' => array(
		'start' => '118872303',
		'end' => '118876966',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Ivd-004'
	),
	'ENSMUST00000152191' => array(
		'start' => '118875707',
		'end' => '118881015',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Ivd-007'
	),
	'ENSMUST00000154104' => array(
		'start' => '118876433',
		'end' => '118877900',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Ivd-008'
	),
	'ENSMUST00000133534' => array(
		'start' => '118829874',
		'end' => '118834122',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'Gm14091-001'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_00070I_0002' => array(
		'genes_in_region' => array(
			'ENSMUSG00000027331' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000027332' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000086421' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Liver',
			(int) 8 => 'Muscle',
			(int) 9 => 'Ovary',
			(int) 10 => 'Placenta',
			(int) 11 => 'Testis',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Liver',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Kidney',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Muscle',
			(int) 22 => 'Ovary',
			(int) 23 => 'Placenta',
			(int) 24 => 'Adipose',
			(int) 25 => 'Adrenal',
			(int) 26 => 'Bladder',
			(int) 27 => 'Brain',
			(int) 28 => 'Breast',
			(int) 29 => 'Colon',
			(int) 30 => 'Heart',
			(int) 31 => 'Kidney',
			(int) 32 => 'Liver',
			(int) 33 => 'Lung',
			(int) 34 => 'Muscle',
			(int) 35 => 'Ovary',
			(int) 36 => 'Placenta',
			(int) 37 => 'Testis',
			(int) 38 => 'Liver',
			(int) 39 => 'Muscle',
			(int) 40 => 'Ovary',
			(int) 41 => 'Placenta',
			(int) 42 => 'Testis',
			(int) 43 => 'Adipose',
			(int) 44 => 'Adrenal',
			(int) 45 => 'Bladder',
			(int) 46 => 'Brain',
			(int) 47 => 'Breast',
			(int) 48 => 'Colon',
			(int) 49 => 'Heart',
			(int) 50 => 'Kidney',
			(int) 51 => 'Liver',
			(int) 52 => 'Lung',
			(int) 53 => 'Muscle',
			(int) 54 => 'Ovary',
			(int) 55 => 'Placenta',
			(int) 56 => 'Testis',
			(int) 57 => 'Ovary',
			(int) 58 => 'Adipose',
			(int) 59 => 'Brain',
			(int) 60 => 'Colon',
			(int) 61 => 'Heart',
			(int) 62 => 'Liver',
			(int) 63 => 'Muscle',
			(int) 64 => 'Ovary',
			(int) 65 => 'Placenta',
			(int) 66 => 'Testis',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Muscle',
			(int) 70 => 'Placenta'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_00070I_0001',
		'tax_id' => '9606',
		'chromosome' => '15',
		'seq_start' => '40382721',
		'seq_end' => '40435947',
		'region_length' => '53226',
		'region_type' => 'CGP',
		'el_id' => 'ENSG00000128944-ENSG00000128928'
	)
)
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]Code Context
        <tr><th colspan="2">Gene</th><th>Transcript</th><th>Position</th><th>Biotype</th></tr>
        <?php foreach ($region_arr[$accession["region_elements"]["region_element_id"]]['genes_in_region'] as $gene_key => $gene_el): ?>
$viewFile = '/var/www/c-it-loci/app/View/Region/show.ctp'
$dataForView = array(
	'region_arr' => array(
		'CIL_00070I_0002' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	),
	'gene_desc_arr' => array(
		'ENSG00000128928' => 'isovaleryl-CoA dehydrogenase',
		'ENSG00000128944' => 'kinetochore-localized astrin/SPAG5 binding protein',
		'ENSMUSG00000027331' => 'kinetochore-localized astrin/SPAG5 binding',
		'ENSMUSG00000027332' => 'isovaleryl coenzyme A dehydrogenase',
		'ENSMUSG00000086421' => 'predicted gene 14091'
	),
	'gene_name_arr' => array(
		'ENSG00000128928' => 'IVD',
		'ENSG00000128944' => 'KNSTRN',
		'ENSMUSG00000027331' => 'Knstrn',
		'ENSMUSG00000027332' => 'Ivd',
		'ENSMUSG00000086421' => 'Gm14091'
	),
	'accession_table' => array(
		(int) 0 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		),
		(int) 1 => array(
			'region_elements' => array(
				[maximum depth reached]
			)
		)
	),
	'all_tissues' => array(
		(int) 0 => 'Adipose',
		(int) 6 => 'Adrenal',
		(int) 10 => 'Bladder',
		(int) 18 => 'Brain',
		(int) 25 => 'Breast',
		(int) 31 => 'Colon',
		(int) 40 => 'Heart',
		(int) 50 => 'Kidney',
		(int) 59 => 'Liver',
		(int) 73 => 'Lung',
		(int) 81 => 'Muscle',
		(int) 96 => 'Ovary',
		(int) 111 => 'Placenta',
		(int) 125 => 'Testis'
	),
	'column_titles' => array(
		(int) 0 => 'Region Sub-Accession',
		(int) 1 => 'Tax ID',
		(int) 2 => 'Position',
		(int) 3 => 'Region Length'
	),
	'geneviewer' => array(
		(int) 9606 => array(
			'version' => 'GRCh38',
			'coord_key' => 'Homo sapiens',
			'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCh38.2bit',
			'bwgURI' => '/static/files/GRCh38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 10090 => array(
			'version' => 'GRCm38',
			'coord_key' => 'Mus musculus',
			'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
			'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
			'desc' => 'Gene structures from GENCODE 19',
			'twoBitURI' => '/static/files/GRCm38.2bit',
			'bwgURI' => '/static/files/GRCm38.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		),
		(int) 7955 => array(
			'version' => 'Zv9',
			'coord_key' => 'Danio rerio',
			'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
			'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
			'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
			'twoBitURI' => '/static/files/Zv9.2bit',
			'bwgURI' => '/static/files/Zv9.77.bb',
			'stylesheet_uri' => '/static/files/gencode.xml',
			'collapseSuperGroups' => 'true',
			'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
		)
	),
	'transcript_count' => (int) 47,
	'longest_tissue_len' => (int) 8,
	'transcript_data' => array(
		'ENST00000466756' => array(
			'start' => '40416167',
			'end' => '40424473',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-008'
		),
		'ENST00000473112' => array(
			'start' => '40407946',
			'end' => '40435556',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-006'
		),
		'ENST00000479013' => array(
			'start' => '40405795',
			'end' => '40421299',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-002'
		),
		'ENST00000481262' => array(
			'start' => '40410736',
			'end' => '40435765',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'IVD-010'
		),
		'ENST00000484250' => array(
			'start' => '40410719',
			'end' => '40413178',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'IVD-005'
		),
		'ENST00000487418' => array(
			'start' => '40405795',
			'end' => '40418767',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-001'
		),
		'ENST00000491554' => array(
			'start' => '40411608',
			'end' => '40435947',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-009'
		),
		'ENST00000497252' => array(
			'start' => '40412612',
			'end' => '40418175',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'IVD-007'
		),
		'ENST00000497816' => array(
			'start' => '40415146',
			'end' => '40419157',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'IVD-003'
		),
		'ENST00000558610' => array(
			'start' => '40406074',
			'end' => '40411690',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-013'
		),
		'ENST00000559575' => array(
			'start' => '40416155',
			'end' => '40419373',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-012'
		),
		'ENST00000560660' => array(
			'start' => '40414406',
			'end' => '40415461',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'IVD-011'
		),
		'ENST00000610693' => array(
			'start' => '40405795',
			'end' => '40411351',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'IVD-004'
		),
		'ENST00000249776' => array(
			'start' => '40382721',
			'end' => '40394245',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'KNSTRN-001'
		),
		'ENST00000416151' => array(
			'start' => '40382721',
			'end' => '40394154',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'KNSTRN-005'
		),
		'ENST00000448395' => array(
			'start' => '40382836',
			'end' => '40394172',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'KNSTRN-003'
		),
		'ENST00000557920' => array(
			'start' => '40382996',
			'end' => '40389929',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'KNSTRN-011'
		),
		'ENST00000559083' => array(
			'start' => '40383255',
			'end' => '40392023',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-014'
		),
		'ENST00000559304' => array(
			'start' => '40382980',
			'end' => '40393618',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-013'
		),
		'ENST00000559591' => array(
			'start' => '40382941',
			'end' => '40384922',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'KNSTRN-008'
		),
		'ENST00000559604' => array(
			'start' => '40382721',
			'end' => '40383438',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'KNSTRN-006'
		),
		'ENST00000560220' => array(
			'start' => '40382976',
			'end' => '40393626',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-007'
		),
		'ENST00000560321' => array(
			'start' => '40382939',
			'end' => '40393677',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-015'
		),
		'ENST00000560673' => array(
			'start' => '40383004',
			'end' => '40386848',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'KNSTRN-010'
		),
		'ENST00000560981' => array(
			'start' => '40382721',
			'end' => '40394172',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-002'
		),
		'ENST00000561169' => array(
			'start' => '40382979',
			'end' => '40394160',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'KNSTRN-004'
		),
		'ENST00000561196' => array(
			'start' => '40382976',
			'end' => '40384676',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'KNSTRN-009'
		),
		'ENST00000561367' => array(
			'start' => '40389808',
			'end' => '40392000',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'KNSTRN-012'
		),
		'ENST00000608100' => array(
			'start' => '40382941',
			'end' => '40394246',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'KNSTRN-016'
		),
		'ENSMUST00000028803' => array(
			'start' => '118814254',
			'end' => '118834642',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Knstrn-002'
		),
		'ENSMUST00000110842' => array(
			'start' => '118814233',
			'end' => '118834158',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Knstrn-004'
		),
		'ENSMUST00000123104' => array(
			'start' => '118814296',
			'end' => '118834068',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'Knstrn-006'
		),
		'ENSMUST00000126045' => array(
			'start' => '118814277',
			'end' => '118830969',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Knstrn-005'
		),
		'ENSMUST00000134579' => array(
			'start' => '118814232',
			'end' => '118834249',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'Knstrn-003'
		),
		'ENSMUST00000134661' => array(
			'start' => '118814003',
			'end' => '118837696',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Knstrn-001'
		),
		'ENSMUST00000148877' => array(
			'start' => '118834075',
			'end' => '118853957',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'Knstrn-007'
		),
		'ENSMUST00000176463' => array(
			'start' => '118831583',
			'end' => '118837143',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'Knstrn-009'
		),
		'ENSMUST00000177103' => array(
			'start' => '118814232',
			'end' => '118834181',
			'transcript_biotype' => 'nonsense_mediated_decay',
			'transcript_name' => 'Knstrn-008'
		),
		'ENSMUST00000028807' => array(
			'start' => '118861954',
			'end' => '118882909',
			'transcript_biotype' => 'protein_coding',
			'transcript_name' => 'Ivd-001'
		),
		'ENSMUST00000125766' => array(
			'start' => '118874307',
			'end' => '118880579',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Ivd-006'
		),
		'ENSMUST00000126082' => array(
			'start' => '118862028',
			'end' => '118870397',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Ivd-002'
		),
		'ENSMUST00000140282' => array(
			'start' => '118872767',
			'end' => '118874761',
			'transcript_biotype' => 'retained_intron',
			'transcript_name' => 'Ivd-005'
		),
		'ENSMUST00000141836' => array(
			'start' => '118871378',
			'end' => '118872277',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Ivd-003'
		),
		'ENSMUST00000150162' => array(
			'start' => '118872303',
			'end' => '118876966',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Ivd-004'
		),
		'ENSMUST00000152191' => array(
			'start' => '118875707',
			'end' => '118881015',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Ivd-007'
		),
		'ENSMUST00000154104' => array(
			'start' => '118876433',
			'end' => '118877900',
			'transcript_biotype' => 'processed_transcript',
			'transcript_name' => 'Ivd-008'
		),
		'ENSMUST00000133534' => array(
			'start' => '118829874',
			'end' => '118834122',
			'transcript_biotype' => 'antisense',
			'transcript_name' => 'Gm14091-001'
		)
	),
	'accession_map' => array(
		'ENST000' => '9606',
		'ENSMUST' => '10090',
		'ENSDART' => '7955',
		'ENSG000' => '9606',
		'ENSMUSG' => '10090',
		'ENSDARG' => '7955'
	),
	'sci_name_map' => array(
		(int) 9606 => 'Homo_sapiens',
		(int) 10090 => 'Mus_musculus',
		(int) 7955 => 'Danio_rerio'
	),
	'UCSC_links' => array(
		(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
		(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
		(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
	),
	'expressed_region_arr' => array(
		'CIL_00070I_0002' => array(
			'genes_in_region' => array(
				[maximum depth reached]
			),
			'tissues_title' => array(
				[maximum depth reached]
			)
		)
	)
)
$region_arr = array(
	'CIL_00070I_0002' => array(
		'genes_in_region' => array(
			'ENSMUSG00000027331' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000027332' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000086421' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Liver',
			(int) 8 => 'Muscle',
			(int) 9 => 'Ovary',
			(int) 10 => 'Placenta',
			(int) 11 => 'Testis',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Liver',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Kidney',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Muscle',
			(int) 22 => 'Ovary',
			(int) 23 => 'Placenta',
			(int) 24 => 'Adipose',
			(int) 25 => 'Adrenal',
			(int) 26 => 'Bladder',
			(int) 27 => 'Brain',
			(int) 28 => 'Breast',
			(int) 29 => 'Colon',
			(int) 30 => 'Heart',
			(int) 31 => 'Kidney',
			(int) 32 => 'Liver',
			(int) 33 => 'Lung',
			(int) 34 => 'Muscle',
			(int) 35 => 'Ovary',
			(int) 36 => 'Placenta',
			(int) 37 => 'Testis',
			(int) 38 => 'Liver',
			(int) 39 => 'Muscle',
			(int) 40 => 'Ovary',
			(int) 41 => 'Placenta',
			(int) 42 => 'Testis',
			(int) 43 => 'Adipose',
			(int) 44 => 'Adrenal',
			(int) 45 => 'Bladder',
			(int) 46 => 'Brain',
			(int) 47 => 'Breast',
			(int) 48 => 'Colon',
			(int) 49 => 'Heart',
			(int) 50 => 'Kidney',
			(int) 51 => 'Liver',
			(int) 52 => 'Lung',
			(int) 53 => 'Muscle',
			(int) 54 => 'Ovary',
			(int) 55 => 'Placenta',
			(int) 56 => 'Testis',
			(int) 57 => 'Ovary',
			(int) 58 => 'Adipose',
			(int) 59 => 'Brain',
			(int) 60 => 'Colon',
			(int) 61 => 'Heart',
			(int) 62 => 'Liver',
			(int) 63 => 'Muscle',
			(int) 64 => 'Ovary',
			(int) 65 => 'Placenta',
			(int) 66 => 'Testis',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Muscle',
			(int) 70 => 'Placenta'
		)
	)
)
$gene_desc_arr = array(
	'ENSG00000128928' => 'isovaleryl-CoA dehydrogenase',
	'ENSG00000128944' => 'kinetochore-localized astrin/SPAG5 binding protein',
	'ENSMUSG00000027331' => 'kinetochore-localized astrin/SPAG5 binding',
	'ENSMUSG00000027332' => 'isovaleryl coenzyme A dehydrogenase',
	'ENSMUSG00000086421' => 'predicted gene 14091'
)
$gene_name_arr = array(
	'ENSG00000128928' => 'IVD',
	'ENSG00000128944' => 'KNSTRN',
	'ENSMUSG00000027331' => 'Knstrn',
	'ENSMUSG00000027332' => 'Ivd',
	'ENSMUSG00000086421' => 'Gm14091'
)
$accession_table = array(
	(int) 0 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_00070I_0001',
			'tax_id' => '9606',
			'chromosome' => '15',
			'seq_start' => '40382721',
			'seq_end' => '40435947',
			'region_length' => '53226',
			'region_type' => 'CGP',
			'el_id' => 'ENSG00000128944-ENSG00000128928'
		)
	),
	(int) 1 => array(
		'region_elements' => array(
			'region_element_id' => 'CIL_00070I_0002',
			'tax_id' => '10090',
			'chromosome' => '2',
			'seq_start' => '118814003',
			'seq_end' => '118882909',
			'region_length' => '68906',
			'region_type' => 'CGP',
			'el_id' => 'ENSMUSG00000027331-ENSMUSG00000027332'
		)
	)
)
$all_tissues = array(
	(int) 0 => 'Adipose',
	(int) 6 => 'Adrenal',
	(int) 10 => 'Bladder',
	(int) 18 => 'Brain',
	(int) 25 => 'Breast',
	(int) 31 => 'Colon',
	(int) 40 => 'Heart',
	(int) 50 => 'Kidney',
	(int) 59 => 'Liver',
	(int) 73 => 'Lung',
	(int) 81 => 'Muscle',
	(int) 96 => 'Ovary',
	(int) 111 => 'Placenta',
	(int) 125 => 'Testis'
)
$column_titles = array(
	(int) 0 => 'Region Sub-Accession',
	(int) 1 => 'Tax ID',
	(int) 2 => 'Position',
	(int) 3 => 'Region Length'
)
$geneviewer = array(
	(int) 9606 => array(
		'version' => 'GRCh38',
		'coord_key' => 'Homo sapiens',
		'reference_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Homo_sapiens.GRCh38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCh38.2bit',
		'bwgURI' => '/static/files/GRCh38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 10090 => array(
		'version' => 'GRCm38',
		'coord_key' => 'Mus musculus',
		'reference_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.reference',
		'gene_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Mus_musculus.GRCm38.transcript',
		'desc' => 'Gene structures from GENCODE 19',
		'twoBitURI' => '/static/files/GRCm38.2bit',
		'bwgURI' => '/static/files/GRCm38.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	),
	(int) 7955 => array(
		'version' => 'Zv9',
		'coord_key' => 'Danio rerio',
		'reference_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.reference',
		'gene_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.gene',
		'transcript_url' => 'http://www.ensembl.org/das/Danio_rerio.Zv9.transcript',
		'twoBitURI' => '/static/files/Zv9.2bit',
		'bwgURI' => '/static/files/Zv9.77.bb',
		'stylesheet_uri' => '/static/files/gencode.xml',
		'collapseSuperGroups' => 'true',
		'trixURI' => '//www.biodalliance.org/datasets/geneIndex.ix'
	)
)
$transcript_count = (int) 47
$longest_tissue_len = (int) 8
$transcript_data = array(
	'ENST00000466756' => array(
		'start' => '40416167',
		'end' => '40424473',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-008'
	),
	'ENST00000473112' => array(
		'start' => '40407946',
		'end' => '40435556',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-006'
	),
	'ENST00000479013' => array(
		'start' => '40405795',
		'end' => '40421299',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-002'
	),
	'ENST00000481262' => array(
		'start' => '40410736',
		'end' => '40435765',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'IVD-010'
	),
	'ENST00000484250' => array(
		'start' => '40410719',
		'end' => '40413178',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'IVD-005'
	),
	'ENST00000487418' => array(
		'start' => '40405795',
		'end' => '40418767',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-001'
	),
	'ENST00000491554' => array(
		'start' => '40411608',
		'end' => '40435947',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-009'
	),
	'ENST00000497252' => array(
		'start' => '40412612',
		'end' => '40418175',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'IVD-007'
	),
	'ENST00000497816' => array(
		'start' => '40415146',
		'end' => '40419157',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'IVD-003'
	),
	'ENST00000558610' => array(
		'start' => '40406074',
		'end' => '40411690',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-013'
	),
	'ENST00000559575' => array(
		'start' => '40416155',
		'end' => '40419373',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-012'
	),
	'ENST00000560660' => array(
		'start' => '40414406',
		'end' => '40415461',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'IVD-011'
	),
	'ENST00000610693' => array(
		'start' => '40405795',
		'end' => '40411351',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'IVD-004'
	),
	'ENST00000249776' => array(
		'start' => '40382721',
		'end' => '40394245',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'KNSTRN-001'
	),
	'ENST00000416151' => array(
		'start' => '40382721',
		'end' => '40394154',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'KNSTRN-005'
	),
	'ENST00000448395' => array(
		'start' => '40382836',
		'end' => '40394172',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'KNSTRN-003'
	),
	'ENST00000557920' => array(
		'start' => '40382996',
		'end' => '40389929',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'KNSTRN-011'
	),
	'ENST00000559083' => array(
		'start' => '40383255',
		'end' => '40392023',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-014'
	),
	'ENST00000559304' => array(
		'start' => '40382980',
		'end' => '40393618',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-013'
	),
	'ENST00000559591' => array(
		'start' => '40382941',
		'end' => '40384922',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'KNSTRN-008'
	),
	'ENST00000559604' => array(
		'start' => '40382721',
		'end' => '40383438',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'KNSTRN-006'
	),
	'ENST00000560220' => array(
		'start' => '40382976',
		'end' => '40393626',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-007'
	),
	'ENST00000560321' => array(
		'start' => '40382939',
		'end' => '40393677',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-015'
	),
	'ENST00000560673' => array(
		'start' => '40383004',
		'end' => '40386848',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'KNSTRN-010'
	),
	'ENST00000560981' => array(
		'start' => '40382721',
		'end' => '40394172',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-002'
	),
	'ENST00000561169' => array(
		'start' => '40382979',
		'end' => '40394160',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'KNSTRN-004'
	),
	'ENST00000561196' => array(
		'start' => '40382976',
		'end' => '40384676',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'KNSTRN-009'
	),
	'ENST00000561367' => array(
		'start' => '40389808',
		'end' => '40392000',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'KNSTRN-012'
	),
	'ENST00000608100' => array(
		'start' => '40382941',
		'end' => '40394246',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'KNSTRN-016'
	),
	'ENSMUST00000028803' => array(
		'start' => '118814254',
		'end' => '118834642',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Knstrn-002'
	),
	'ENSMUST00000110842' => array(
		'start' => '118814233',
		'end' => '118834158',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Knstrn-004'
	),
	'ENSMUST00000123104' => array(
		'start' => '118814296',
		'end' => '118834068',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'Knstrn-006'
	),
	'ENSMUST00000126045' => array(
		'start' => '118814277',
		'end' => '118830969',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Knstrn-005'
	),
	'ENSMUST00000134579' => array(
		'start' => '118814232',
		'end' => '118834249',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'Knstrn-003'
	),
	'ENSMUST00000134661' => array(
		'start' => '118814003',
		'end' => '118837696',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Knstrn-001'
	),
	'ENSMUST00000148877' => array(
		'start' => '118834075',
		'end' => '118853957',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'Knstrn-007'
	),
	'ENSMUST00000176463' => array(
		'start' => '118831583',
		'end' => '118837143',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'Knstrn-009'
	),
	'ENSMUST00000177103' => array(
		'start' => '118814232',
		'end' => '118834181',
		'transcript_biotype' => 'nonsense_mediated_decay',
		'transcript_name' => 'Knstrn-008'
	),
	'ENSMUST00000028807' => array(
		'start' => '118861954',
		'end' => '118882909',
		'transcript_biotype' => 'protein_coding',
		'transcript_name' => 'Ivd-001'
	),
	'ENSMUST00000125766' => array(
		'start' => '118874307',
		'end' => '118880579',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Ivd-006'
	),
	'ENSMUST00000126082' => array(
		'start' => '118862028',
		'end' => '118870397',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Ivd-002'
	),
	'ENSMUST00000140282' => array(
		'start' => '118872767',
		'end' => '118874761',
		'transcript_biotype' => 'retained_intron',
		'transcript_name' => 'Ivd-005'
	),
	'ENSMUST00000141836' => array(
		'start' => '118871378',
		'end' => '118872277',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Ivd-003'
	),
	'ENSMUST00000150162' => array(
		'start' => '118872303',
		'end' => '118876966',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Ivd-004'
	),
	'ENSMUST00000152191' => array(
		'start' => '118875707',
		'end' => '118881015',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Ivd-007'
	),
	'ENSMUST00000154104' => array(
		'start' => '118876433',
		'end' => '118877900',
		'transcript_biotype' => 'processed_transcript',
		'transcript_name' => 'Ivd-008'
	),
	'ENSMUST00000133534' => array(
		'start' => '118829874',
		'end' => '118834122',
		'transcript_biotype' => 'antisense',
		'transcript_name' => 'Gm14091-001'
	)
)
$accession_map = array(
	'ENST000' => '9606',
	'ENSMUST' => '10090',
	'ENSDART' => '7955',
	'ENSG000' => '9606',
	'ENSMUSG' => '10090',
	'ENSDARG' => '7955'
)
$sci_name_map = array(
	(int) 9606 => 'Homo_sapiens',
	(int) 10090 => 'Mus_musculus',
	(int) 7955 => 'Danio_rerio'
)
$UCSC_links = array(
	(int) 7955 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=danRer7&position=',
	(int) 9606 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg38&position=',
	(int) 10090 => 'http://genome.ucsc.edu/cgi-bin/hgTracks?db=mm10&position='
)
$expressed_region_arr = array(
	'CIL_00070I_0002' => array(
		'genes_in_region' => array(
			'ENSMUSG00000027331' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000027332' => array(
				[maximum depth reached]
			),
			'ENSMUSG00000086421' => array(
				[maximum depth reached]
			)
		),
		'tissues_title' => array(
			(int) 0 => 'Adipose',
			(int) 1 => 'Adrenal',
			(int) 2 => 'Bladder',
			(int) 3 => 'Brain',
			(int) 4 => 'Breast',
			(int) 5 => 'Colon',
			(int) 6 => 'Heart',
			(int) 7 => 'Liver',
			(int) 8 => 'Muscle',
			(int) 9 => 'Ovary',
			(int) 10 => 'Placenta',
			(int) 11 => 'Testis',
			(int) 12 => 'Bladder',
			(int) 13 => 'Brain',
			(int) 14 => 'Breast',
			(int) 15 => 'Liver',
			(int) 16 => 'Placenta',
			(int) 17 => 'Testis',
			(int) 18 => 'Kidney',
			(int) 19 => 'Placenta',
			(int) 20 => 'Testis',
			(int) 21 => 'Muscle',
			(int) 22 => 'Ovary',
			(int) 23 => 'Placenta',
			(int) 24 => 'Adipose',
			(int) 25 => 'Adrenal',
			(int) 26 => 'Bladder',
			(int) 27 => 'Brain',
			(int) 28 => 'Breast',
			(int) 29 => 'Colon',
			(int) 30 => 'Heart',
			(int) 31 => 'Kidney',
			(int) 32 => 'Liver',
			(int) 33 => 'Lung',
			(int) 34 => 'Muscle',
			(int) 35 => 'Ovary',
			(int) 36 => 'Placenta',
			(int) 37 => 'Testis',
			(int) 38 => 'Liver',
			(int) 39 => 'Muscle',
			(int) 40 => 'Ovary',
			(int) 41 => 'Placenta',
			(int) 42 => 'Testis',
			(int) 43 => 'Adipose',
			(int) 44 => 'Adrenal',
			(int) 45 => 'Bladder',
			(int) 46 => 'Brain',
			(int) 47 => 'Breast',
			(int) 48 => 'Colon',
			(int) 49 => 'Heart',
			(int) 50 => 'Kidney',
			(int) 51 => 'Liver',
			(int) 52 => 'Lung',
			(int) 53 => 'Muscle',
			(int) 54 => 'Ovary',
			(int) 55 => 'Placenta',
			(int) 56 => 'Testis',
			(int) 57 => 'Ovary',
			(int) 58 => 'Adipose',
			(int) 59 => 'Brain',
			(int) 60 => 'Colon',
			(int) 61 => 'Heart',
			(int) 62 => 'Liver',
			(int) 63 => 'Muscle',
			(int) 64 => 'Ovary',
			(int) 65 => 'Placenta',
			(int) 66 => 'Testis',
			(int) 67 => 'Kidney',
			(int) 68 => 'Liver',
			(int) 69 => 'Muscle',
			(int) 70 => 'Placenta'
		)
	)
)
$accession = array(
	'region_elements' => array(
		'region_element_id' => 'CIL_00070I_0001',
		'tax_id' => '9606',
		'chromosome' => '15',
		'seq_start' => '40382721',
		'seq_end' => '40435947',
		'region_length' => '53226',
		'region_type' => 'CGP',
		'el_id' => 'ENSG00000128944-ENSG00000128928'
	)
)
include - APP/View/Region/show.ctp, line 46
View::_evaluate() - CORE/Cake/View/View.php, line 948
View::_render() - CORE/Cake/View/View.php, line 910
View::render() - CORE/Cake/View/View.php, line 471
Controller::render() - CORE/Cake/Controller/Controller.php, line 954
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 198
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Source ID		Type	Tax ID	Position
ENSG00000128944-ENSG00000128928		CGP	9606	15:40382721-40435947
Gene		Transcript	Position	Biotype

Source ID	Type	Tax ID	Position
ENSMUSG00000027331-ENSMUSG00000027332	CGP	10090	2:118814003-118882909
Gene	Transcript	Position	Biotype
ENSMUSG00000027331 (Knstrn) kinetochore-localized astrin/SPAG5 binding	ENSMUST00000028803 (Knstrn-002)	118814254-118834642	protein_coding
	ENSMUST00000110842 (Knstrn-004)	118814233-118834158	protein_coding
	ENSMUST00000123104 (Knstrn-006)	118814296-118834068	nonsense_mediated_decay
	ENSMUST00000126045 (Knstrn-005)	118814277-118830969	protein_coding
	ENSMUST00000134579 (Knstrn-003)	118814232-118834249	nonsense_mediated_decay
	ENSMUST00000134661 (Knstrn-001)	118814003-118837696	protein_coding
	ENSMUST00000148877 (Knstrn-007)	118834075-118853957	nonsense_mediated_decay
	ENSMUST00000176463 (Knstrn-009)	118831583-118837143	nonsense_mediated_decay
	ENSMUST00000177103 (Knstrn-008)	118814232-118834181	nonsense_mediated_decay
ENSMUSG00000027332 (Ivd) isovaleryl coenzyme A dehydrogenase	ENSMUST00000028807 (Ivd-001)	118861954-118882909	protein_coding
	ENSMUST00000125766 (Ivd-006)	118874307-118880579	processed_transcript
	ENSMUST00000126082 (Ivd-002)	118862028-118870397	retained_intron
	ENSMUST00000140282 (Ivd-005)	118872767-118874761	retained_intron
	ENSMUST00000141836 (Ivd-003)	118871378-118872277	processed_transcript
	ENSMUST00000150162 (Ivd-004)	118872303-118876966	processed_transcript
	ENSMUST00000152191 (Ivd-007)	118875707-118881015	processed_transcript
	ENSMUST00000154104 (Ivd-008)	118876433-118877900	processed_transcript
ENSMUSG00000086421 (Gm14091) predicted gene 14091	ENSMUST00000133534 (Gm14091-001)	118829874-118834122	antisense

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

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