C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB2B, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129472 RAB2B 9606 - 14:21459020-21476973 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000397762 RAB2B-001 21459020-21476973 protein_coding
  ENST00000417141 RAB2B-007 21461198-21476958 nonsense_mediated_decay
  ENST00000461909 RAB2B-006 21461245-21476673 processed_transcript
  ENST00000475857 RAB2B-004 21474520-21476960 processed_transcript
  ENST00000485996 RAB2B-005 21476267-21476936 processed_transcript
  ENST00000622293 RAB2B-201 21459027-21476934 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLiverLungOvaryTestisENST00000397762ENST00000622293
Transcript ID Adrenal Bladder Brain Breast Colon Heart Liver Lung Ovary Testis
ENST00000397762 10.528±0.00 2.064±0.00 8.462±2.01 6.537±0.29 N/A 3.379±0.81 2.929±0.00 3.966±0.00 7.160±1.00 9.517±0.00
ENST00000622293 N/A N/A 7.018±0.00 N/A 6.220±0.00 N/A 5.397±0.00 4.126±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JD CIL_0003JD_0001 CGP 14:21385194-21476973
CIL_0008CX CIL_0008CX_0001 VISTA 14:21403052-22005074
CIL_0005QL CIL_0005QL_0001 CGP 14:21459020-21499175

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0045921 IMP positive regulation of exocytosis
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022159 Rab2b RAB2B, member RAS oncogene family protein_coding Mus_musculus

Loading