C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin alpha FG-GAP repeat containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129636 ITFG1 9606 - 16:47154387-47464149 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000320640 ITFG1-001 47154387-47461274 protein_coding
  ENST00000537184 ITFG1-011 47155301-47311950 processed_transcript
  ENST00000542691 ITFG1-006 47155557-47396220 processed_transcript
  ENST00000544001 ITFG1-002 47155605-47461274 protein_coding
  ENST00000563350 ITFG1-005 47425784-47459169 processed_transcript
  ENST00000563730 ITFG1-012 47451396-47464149 protein_coding
  ENST00000564825 ITFG1-008 47260660-47263014 processed_transcript
  ENST00000565262 ITFG1-010 47155672-47258722 protein_coding
  ENST00000565940 ITFG1-003 47448098-47459130 protein_coding
  ENST00000567957 ITFG1-009 47155585-47238289 retained_intron
  ENST00000568047 ITFG1-004 47154387-47312275 processed_transcript
  ENST00000569551 ITFG1-007 47365571-47452757 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000320640ENST00000537184ENST00000542691ENST00000544001
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000320640 2.598±0.00 3.366±0.00 7.159±0.00 25.271±4.19 7.636±0.00 6.878±2.93 2.962±1.23 5.807±0.00 5.361±0.00 4.960±0.00 2.884±0.00 6.597±0.30 9.624±1.95 9.485±0.00
ENST00000537184 N/A N/A N/A N/A N/A 6.383±0.00 N/A N/A N/A N/A N/A 9.129±0.00 N/A N/A
ENST00000542691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.857±0.00 N/A N/A
ENST00000544001 7.112±0.00 8.444±0.00 N/A 15.688±0.00 12.068±0.00 7.610±0.00 14.025±0.00 15.929±0.00 10.663±4.26 11.901±0.00 N/A 7.551±0.65 22.120±4.90 12.194±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VK CIL_0002VK_0001 CGP 16:47077703-47464149
CIL_0002VL CIL_0002VL_0001 CGP 16:47154387-47701523

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075584 ITFG1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000031703 Itfg1 integrin alpha FG-GAP repeat containing 1 protein_coding Mus_musculus

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