C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002VL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129636-ENSG00000102893 CGP 9606 16:47154387-47701523
GeneTranscriptPositionBiotype
ENSG00000102893 (PHKB)
phosphorylase kinase, beta 		ENST00000299167 (PHKB-001) 47461326-47701523 protein_coding
ENST00000323584 (PHKB-002) 47461327-47700343 protein_coding
ENST00000563376 (PHKB-014) 47461350-47511731 protein_coding
ENST00000564711 (PHKB-009) 47696472-47699694 protein_coding
ENST00000564873 (PHKB-017) 47462667-47499831 protein_coding
ENST00000565424 (PHKB-013) 47461331-47548164 retained_intron
ENST00000566037 (PHKB-003) 47461123-47547547 protein_coding
ENST00000566044 (PHKB-004) 47461295-47699745 protein_coding
ENST00000566275 (PHKB-010) 47660703-47676409 protein_coding
ENST00000566319 (PHKB-007) 47664790-47700348 retained_intron
ENST00000566436 (PHKB-006) 47594150-47598036 processed_transcript
ENST00000566721 (PHKB-015) 47461329-47463522 processed_transcript
ENST00000567200 (PHKB-016) 47462112-47463969 protein_coding
ENST00000567402 (PHKB-005) 47461336-47590838 processed_transcript
ENST00000568171 (PHKB-008) 47650830-47664390 retained_intron
ENST00000568439 (PHKB-011) 47596428-47619429 protein_coding
ENST00000570047 (PHKB-012) 47499756-47587758 nonsense_mediated_decay
ENSG00000129636 (ITFG1)
integrin alpha FG-GAP repeat containing 1 		ENST00000320640 (ITFG1-001) 47154387-47461274 protein_coding
ENST00000537184 (ITFG1-011) 47155301-47311950 processed_transcript
ENST00000542691 (ITFG1-006) 47155557-47396220 processed_transcript
ENST00000544001 (ITFG1-002) 47155605-47461274 protein_coding
ENST00000563350 (ITFG1-005) 47425784-47459169 processed_transcript
ENST00000563730 (ITFG1-012) 47451396-47464149 protein_coding
ENST00000564825 (ITFG1-008) 47260660-47263014 processed_transcript
ENST00000565262 (ITFG1-010) 47155672-47258722 protein_coding
ENST00000565940 (ITFG1-003) 47448098-47459130 protein_coding
ENST00000567957 (ITFG1-009) 47155585-47238289 retained_intron
ENST00000568047 (ITFG1-004) 47154387-47312275 processed_transcript
ENST00000569551 (ITFG1-007) 47365571-47452757 retained_intron
ENSG00000222268 (RNA5SP425)
RNA, 5S ribosomal pseudogene 425 		ENST00000410336 (RNA5SP425-201) 47505432-47505543 rRNA
ENSG00000222767 (Y_RNA)
Y RNA 		ENST00000410835 (Y_RNA.1-818) 47313027-47313121 misc_RNA
ENSG00000259918 (NDUFA5P11)
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 pseudogene 11 		ENST00000567995 (NDUFA5P11-001) 47598654-47598996 processed_pseudogene
ENSG00000260744 (RP11-329J18.3)
 ENST00000563757 (RP11-329J18.3-001) 47196311-47202429 antisense
ENSG00000261336 (EIF4BP5)
eukaryotic translation initiation factor 4B pseudogene 5 		ENST00000567338 (EIF4BP5-001) 47565090-47566884 processed_pseudogene
ENSG00000261369 (RP11-474B12.1)
 ENST00000564739 (RP11-474B12.1-001) 47299447-47317814 antisense
ENSG00000262038 (RP11-177N22.3)
 ENST00000573040 (RP11-177N22.3-001) 47529190-47529916 sense_intronic
ENSG00000279509 (RP11-329J18.5)
 ENST00000624660 (RP11-329J18.5-001) 47218026-47218768 TEC
CIL_0002VL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031703-ENSMUSG00000036879 CGP 10090 8:85717557-86061376
GeneTranscriptPositionBiotype
ENSMUSG00000031703 (Itfg1)
integrin alpha FG-GAP repeat containing 1 		ENSMUST00000034140 (Itfg1-201) 85717557-85840949 protein_coding
ENSMUSG00000036879 (Phkb)
phosphorylase kinase beta 		ENSMUST00000053771 (Phkb-001) 85841002-86061376 protein_coding
ENSMUST00000159716 (Phkb-006) 85840959-85879725 processed_transcript
ENSMUST00000159882 (Phkb-004) 85841008-85922416 processed_transcript
ENSMUST00000160611 (Phkb-003) 85840991-85937046 nonsense_mediated_decay
ENSMUST00000160731 (Phkb-005) 86017432-86030391 protein_coding
ENSMUST00000161850 (Phkb-009) 85841016-85922150 protein_coding
ENSMUST00000162305 (Phkb-002) 86035646-86060641 processed_transcript
ENSMUST00000162464 (Phkb-007) 85842787-85896537 protein_coding
ENSMUST00000162981 (Phkb-008) 85843051-85879812 nonsense_mediated_decay
ENSMUSG00000090043 (Gm16167)
predicted gene 16167 		ENSMUST00000160428 (Gm16167-001) 85853373-85854437 processed_pseudogene
ENSMUSG00000098439 (Hm629797)
cDNA sequence HM629797 		ENSMUST00000183645 (Hm629797-001) 85994245-85996642 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VL_0001ENSG00000102893ENST00000299167ENST00000323584ENST00000566044ENSG00000129636ENST00000320640ENST00000537184ENST00000542691ENST00000544001ENSG00000222268ENST00000410336ENSG00000222767ENST00000410835ENSG00000259918ENST00000567995ENSG00000260744ENST00000563757ENSG00000261336ENST00000567338ENSG00000261369ENST00000564739ENSG00000262038ENST00000573040ENSG00000279509ENST00000624660CIL_0002VL_0002ENSMUSG00000031703ENSMUST00000034140ENSMUSG00000036879ENSMUST00000053771ENSMUST00000160731ENSMUST00000162305ENSMUSG00000090043ENSMUST00000160428ENSMUSG00000098439ENSMUST00000183645
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102893 ENST00000299167 N/A 3.796±0.00 N/A 5.179±0.00 4.303±1.28 4.431±0.00 2.311±0.97 3.401±1.50 2.599±0.70 4.386±0.00 10.429±0.00 3.685±1.28 5.229±2.55 6.532±2.37
ENST00000323584 1.923±0.00 4.573±0.00 N/A N/A 6.160±0.00 2.648±0.00 4.236±2.31 5.981±0.00 4.025±0.00 N/A 10.487±6.65 N/A 3.766±0.00 6.843±0.00
ENST00000563376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566044 4.584±0.00 N/A 6.236±0.00 9.416±0.00 5.976±0.76 11.066±0.00 4.376±2.95 6.359±0.85 5.908±0.00 8.545±0.00 9.033±0.00 5.842±1.94 9.900±3.18 12.272±6.15
ENST00000566275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000129636 ENST00000320640 2.598±0.00 3.366±0.00 7.159±0.00 25.271±4.19 7.636±0.00 6.878±2.93 2.962±1.23 5.807±0.00 5.361±0.00 4.960±0.00 2.884±0.00 6.597±0.30 9.624±1.95 9.485±0.00
ENST00000537184 N/A N/A N/A N/A N/A 6.383±0.00 N/A N/A N/A N/A N/A 9.129±0.00 N/A N/A
ENST00000542691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.857±0.00 N/A N/A
ENST00000544001 7.112±0.00 8.444±0.00 N/A 15.688±0.00 12.068±0.00 7.610±0.00 14.025±0.00 15.929±0.00 10.663±4.26 11.901±0.00 N/A 7.551±0.65 22.120±4.90 12.194±0.00
ENST00000563350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222268 ENST00000410336 N/A 1.251±0.00 N/A N/A N/A 0.961±0.00 N/A N/A N/A N/A N/A N/A 2.756±0.00 N/A
ENSG00000222767 ENST00000410835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.622±0.00
ENSG00000259918 ENST00000567995 N/A 0.036±0.00 1.490±0.00 0.106±0.00 0.632±0.00 0.437±0.00 0.066±0.03 0.159±0.00 0.402±0.37 0.801±0.00 N/A 1.878±0.00 N/A N/A
ENSG00000260744 ENST00000563757 N/A 0.108±0.00 N/A 0.185±0.13 0.195±0.17 N/A 0.290±0.12 0.026±0.00 0.415±0.00 0.510±0.00 0.066±0.00 0.058±0.02 0.432±0.00 0.299±0.16
ENSG00000261336 ENST00000567338 0.050±0.00 0.062±0.00 0.350±0.00 0.041±0.00 0.149±0.10 0.260±0.24 0.074±0.05 0.040±0.00 0.190±0.18 0.335±0.32 0.047±0.03 0.092±0.12 0.028±0.02 0.018±0.00
ENSG00000261369 ENST00000564739 N/A 0.211±0.00 N/A 0.064±0.00 N/A 0.227±0.00 0.036±0.00 N/A 0.017±0.00 0.088±0.00 N/A 0.176±0.11 0.109±0.00 0.487±0.03
ENSG00000262038 ENST00000573040 0.359±0.00 0.500±0.00 0.637±0.00 0.121±0.03 0.123±0.04 1.026±0.95 0.026±0.00 0.191±0.00 0.547±0.45 0.215±0.00 0.024±0.00 0.227±0.10 N/A 0.357±0.00
ENSG00000279509 ENST00000624660 0.022±0.00 0.050±0.00 N/A 0.519±0.50 2.487±0.00 0.737±0.00 0.696±0.00 0.722±0.71 0.528±0.51 1.563±1.55 0.482±0.36 1.593±0.00 N/A 0.083±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031703 ENSMUST00000034140 19.430±1.05 49.049±2.30 18.020±0.69 24.985±3.38 14.756±6.86 25.278±1.07 8.148±0.68 27.524±4.00 11.511±2.30 16.502±2.26 14.478±1.50 23.521±6.20 15.991±5.10 14.084±4.48
ENSMUSG00000036879 ENSMUST00000053771 5.170±3.10 5.407±1.80 5.465±4.13 3.738±1.91 6.363±0.59 3.547±0.80 N/A 4.796±1.64 2.211±0.48 4.833±1.49 19.177±4.52 4.598±1.72 1.914±1.20 1.360±0.64
ENSMUST00000159716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.190±0.00 N/A
ENSMUST00000161850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162305 4.548±0.00 5.274±1.76 7.537±0.41 4.864±3.36 10.521±0.53 N/A 2.672±0.17 3.698±0.23 1.919±0.86 N/A 69.690±24.59 9.726±3.15 3.925±2.18 1.736±0.00
ENSMUST00000162464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090043 ENSMUST00000160428 0.210±0.08 0.072±0.00 0.106±0.00 0.039±0.00 0.329±0.19 0.455±0.25 0.130±0.07 0.137±0.07 0.053±0.03 0.169±0.06 0.051±0.00 0.349±0.30 0.106±0.07 2.000±0.51
ENSMUSG00000098439 ENSMUST00000183645 0.026±0.01 0.066±0.00 0.122±0.02 0.066±0.06 0.112±0.07 0.059±0.02 0.014±0.00 0.052±0.03 0.047±0.01 0.061±0.03 0.022±0.01 0.099±0.07 0.051±0.04 0.033±0.02

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