C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002VK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171208-ENSG00000129636 CGP 9606 16:47077703-47464149
GeneTranscriptPositionBiotype
ENSG00000102893 (PHKB)
phosphorylase kinase, beta 		ENST00000299167 (PHKB-001) 47461326-47701523 protein_coding
ENST00000323584 (PHKB-002) 47461327-47700343 protein_coding
ENST00000563376 (PHKB-014) 47461350-47511731 protein_coding
ENST00000564711 (PHKB-009) 47696472-47699694 protein_coding
ENST00000564873 (PHKB-017) 47462667-47499831 protein_coding
ENST00000565424 (PHKB-013) 47461331-47548164 retained_intron
ENST00000566037 (PHKB-003) 47461123-47547547 protein_coding
ENST00000566044 (PHKB-004) 47461295-47699745 protein_coding
ENST00000566275 (PHKB-010) 47660703-47676409 protein_coding
ENST00000566319 (PHKB-007) 47664790-47700348 retained_intron
ENST00000566436 (PHKB-006) 47594150-47598036 processed_transcript
ENST00000566721 (PHKB-015) 47461329-47463522 processed_transcript
ENST00000567200 (PHKB-016) 47462112-47463969 protein_coding
ENST00000567402 (PHKB-005) 47461336-47590838 processed_transcript
ENST00000568171 (PHKB-008) 47650830-47664390 retained_intron
ENST00000568439 (PHKB-011) 47596428-47619429 protein_coding
ENST00000570047 (PHKB-012) 47499756-47587758 nonsense_mediated_decay
ENSG00000129636 (ITFG1)
integrin alpha FG-GAP repeat containing 1 		ENST00000320640 (ITFG1-001) 47154387-47461274 protein_coding
ENST00000537184 (ITFG1-011) 47155301-47311950 processed_transcript
ENST00000542691 (ITFG1-006) 47155557-47396220 processed_transcript
ENST00000544001 (ITFG1-002) 47155605-47461274 protein_coding
ENST00000563350 (ITFG1-005) 47425784-47459169 processed_transcript
ENST00000563730 (ITFG1-012) 47451396-47464149 protein_coding
ENST00000564825 (ITFG1-008) 47260660-47263014 processed_transcript
ENST00000565262 (ITFG1-010) 47155672-47258722 protein_coding
ENST00000565940 (ITFG1-003) 47448098-47459130 protein_coding
ENST00000567957 (ITFG1-009) 47155585-47238289 retained_intron
ENST00000568047 (ITFG1-004) 47154387-47312275 processed_transcript
ENST00000569551 (ITFG1-007) 47365571-47452757 retained_intron
ENSG00000171208 (NETO2)
neuropilin (NRP) and tolloid (TLL)-like 2 		ENST00000303155 (NETO2-002) 47081634-47143709 protein_coding
ENST00000562435 (NETO2-001) 47077703-47143997 protein_coding
ENST00000562559 (NETO2-003) 47082990-47128458 protein_coding
ENST00000563078 (NETO2-004) 47083614-47122903 protein_coding
ENST00000564667 (NETO2-005) 47083107-47109634 protein_coding
ENSG00000222767 (Y_RNA)
Y RNA 		ENST00000410835 (Y_RNA.1-818) 47313027-47313121 misc_RNA
ENSG00000239840 (RPL23AP72)
ribosomal protein L23a pseudogene 72 		ENST00000492447 (RPL23AP72-001) 47150132-47150566 processed_pseudogene
ENSG00000260744 (RP11-329J18.3)
 ENST00000563757 (RP11-329J18.3-001) 47196311-47202429 antisense
ENSG00000261369 (RP11-474B12.1)
 ENST00000564739 (RP11-474B12.1-001) 47299447-47317814 antisense
ENSG00000279509 (RP11-329J18.5)
 ENST00000624660 (RP11-329J18.5-001) 47218026-47218768 TEC
CIL_0002VK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036902-ENSMUSG00000031703 CGP 10090 8:85636588-85840949
GeneTranscriptPositionBiotype
ENSMUSG00000031703 (Itfg1)
integrin alpha FG-GAP repeat containing 1 		ENSMUST00000034140 (Itfg1-201) 85717557-85840949 protein_coding
ENSMUSG00000036902 (Neto2)
neuropilin (NRP) and tolloid (TLL)-like 2 		ENSMUST00000109686 (Neto2-201) 85636588-85690973 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VK_0001ENSG00000102893ENST00000299167ENST00000323584ENST00000566044ENSG00000129636ENST00000320640ENST00000537184ENST00000542691ENST00000544001ENSG00000171208ENST00000303155ENST00000562435ENST00000562559ENST00000563078ENST00000564667ENSG00000222767ENST00000410835ENSG00000239840ENST00000492447ENSG00000260744ENST00000563757ENSG00000261369ENST00000564739ENSG00000279509ENST00000624660CIL_0002VK_0002ENSMUSG00000031703ENSMUST00000034140ENSMUSG00000036902ENSMUST00000109686
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102893 ENST00000299167 N/A 3.796±0.00 N/A 5.179±0.00 4.303±1.28 4.431±0.00 2.311±0.97 3.401±1.50 2.599±0.70 4.386±0.00 10.429±0.00 3.685±1.28 5.229±2.55 6.532±2.37
ENST00000323584 1.923±0.00 4.573±0.00 N/A N/A 6.160±0.00 2.648±0.00 4.236±2.31 5.981±0.00 4.025±0.00 N/A 10.487±6.65 N/A 3.766±0.00 6.843±0.00
ENST00000563376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566044 4.584±0.00 N/A 6.236±0.00 9.416±0.00 5.976±0.76 11.066±0.00 4.376±2.95 6.359±0.85 5.908±0.00 8.545±0.00 9.033±0.00 5.842±1.94 9.900±3.18 12.272±6.15
ENST00000566275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000129636 ENST00000320640 2.598±0.00 3.366±0.00 7.159±0.00 25.271±4.19 7.636±0.00 6.878±2.93 2.962±1.23 5.807±0.00 5.361±0.00 4.960±0.00 2.884±0.00 6.597±0.30 9.624±1.95 9.485±0.00
ENST00000537184 N/A N/A N/A N/A N/A 6.383±0.00 N/A N/A N/A N/A N/A 9.129±0.00 N/A N/A
ENST00000542691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.857±0.00 N/A N/A
ENST00000544001 7.112±0.00 8.444±0.00 N/A 15.688±0.00 12.068±0.00 7.610±0.00 14.025±0.00 15.929±0.00 10.663±4.26 11.901±0.00 N/A 7.551±0.65 22.120±4.90 12.194±0.00
ENST00000563350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171208 ENST00000303155 0.194±0.00 0.652±0.00 N/A 2.356±0.90 0.231±0.01 0.357±0.06 0.207±0.12 1.128±0.00 0.138±0.00 1.201±0.74 0.090±0.00 0.829±0.61 0.813±0.33 2.369±0.32
ENST00000562435 N/A N/A 0.072±0.00 0.682±0.49 0.027±0.00 0.050±0.00 0.042±0.01 N/A 0.016±0.00 N/A N/A 0.066±0.01 0.077±0.01 0.179±0.00
ENST00000562559 N/A 1.176±0.00 N/A N/A 0.306±0.24 0.859±0.00 0.484±0.00 1.046±0.00 N/A N/A 0.632±0.00 N/A 0.660±0.16 1.781±0.28
ENST00000563078 N/A N/A N/A N/A N/A 0.399±0.00 N/A N/A N/A N/A N/A 0.553±0.00 1.037±0.00 2.435±0.00
ENST00000564667 N/A N/A 0.123±0.00 N/A N/A N/A N/A N/A 0.322±0.00 N/A 0.383±0.00 0.388±0.11 N/A N/A
ENSG00000222767 ENST00000410835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.622±0.00
ENSG00000239840 ENST00000492447 N/A N/A N/A N/A N/A 0.102±0.00 N/A N/A N/A N/A N/A N/A N/A 0.109±0.00
ENSG00000260744 ENST00000563757 N/A 0.108±0.00 N/A 0.185±0.13 0.195±0.17 N/A 0.290±0.12 0.026±0.00 0.415±0.00 0.510±0.00 0.066±0.00 0.058±0.02 0.432±0.00 0.299±0.16
ENSG00000261369 ENST00000564739 N/A 0.211±0.00 N/A 0.064±0.00 N/A 0.227±0.00 0.036±0.00 N/A 0.017±0.00 0.088±0.00 N/A 0.176±0.11 0.109±0.00 0.487±0.03
ENSG00000279509 ENST00000624660 0.022±0.00 0.050±0.00 N/A 0.519±0.50 2.487±0.00 0.737±0.00 0.696±0.00 0.722±0.71 0.528±0.51 1.563±1.55 0.482±0.36 1.593±0.00 N/A 0.083±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031703 ENSMUST00000034140 19.430±1.05 49.049±2.30 18.020±0.69 24.985±3.38 14.756±6.86 25.278±1.07 8.148±0.68 27.524±4.00 11.511±2.30 16.502±2.26 14.478±1.50 23.521±6.20 15.991±5.10 14.084±4.48
ENSMUSG00000036902 ENSMUST00000109686 0.829±0.70 0.159±0.10 0.270±0.00 11.601±8.14 0.216±0.08 0.193±0.08 0.217±0.04 0.062±0.02 0.072±0.07 0.354±0.07 0.639±0.34 0.696±0.32 0.227±0.09 0.512±0.16

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