C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cholinergic receptor, nicotinic, alpha 10 (neuronal)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000129749 CHRNA10 9606 - 11:3665587-3671384 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000250699 CHRNA10-001 3665587-3671384 protein_coding
  ENST00000493827 CHRNA10-002 3668500-3669887 processed_transcript
  ENST00000526599 CHRNA10-004 3666036-3671367 nonsense_mediated_decay
  ENST00000534359 CHRNA10-003 3666036-3671367 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JH CIL_0005JH_0001 CGP 11:3645128-3671384
CIL_0005K0 CIL_0005K0_0001 CGP 11:3665587-3797792

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004889 IEA acetylcholine-activated cation-selective channel activity
GO:0005102 TAS receptor binding
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005262 IEA calcium channel activity
GO:0005892 IEA acetylcholine-gated channel complex
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006812 IEA cation transport
GO:0007204 IGI positive regulation of cytosolic calcium ion concentration
GO:0007271 TAS synaptic transmission, cholinergic
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0030424 IEA axon
GO:0034220 IEA ion transmembrane transport
GO:0042127 TAS regulation of cell proliferation
GO:0042472 IEA inner ear morphogenesis
GO:0043204 IEA perikaryon
GO:0045211 IEA postsynaptic membrane
GO:0050910 IEA detection of mechanical stimulus involved in sensory perception of sound
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000066279 Chrna10 cholinergic receptor, nicotinic, alpha polypeptide 10 protein_coding Mus_musculus

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