C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholinergic receptor, nicotinic, alpha 10 (neuronal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000250699 CHRNA10-001 ENSG00000129749 9606 - 11:3665587-3671384 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005JH CIL_0005JH_0001 CGP 11:3645128-3671384
CIL_0005K0 CIL_0005K0_0001 CGP 11:3665587-3797792

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004889 IEA acetylcholine-activated cation-selective channel activity
GO:0005102 TAS receptor binding
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005262 IEA calcium channel activity
GO:0005892 IEA acetylcholine-gated channel complex
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006812 IEA cation transport
GO:0007204 IGI positive regulation of cytosolic calcium ion concentration
GO:0007271 TAS synaptic transmission, cholinergic
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0030424 IEA axon
GO:0042127 TAS regulation of cell proliferation
GO:0042472 IEA inner ear morphogenesis
GO:0043204 IEA perikaryon
GO:0045211 IEA postsynaptic membrane
GO:0050910 IEA detection of mechanical stimulus involved in sensory perception of sound
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084830 Chrna10-201 protein_coding Mus_musculus 0 1443

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