C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: 6-phosphogluconolactonase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130313 PGLS 9606 + 19:17511629-17521288 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252603 PGLS-001 17511629-17521288 protein_coding
  ENST00000594761 PGLS-004 17511636-17521043 nonsense_mediated_decay
  ENST00000595782 PGLS-006 17511865-17521288 protein_coding
  ENST00000596799 PGLS-002 17511644-17513244 retained_intron
  ENST00000598811 PGLS-003 17515742-17521030 retained_intron
  ENST00000600923 PGLS-005 17511670-17517835 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252603ENST00000594761ENST00000595782ENST00000596799
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252603 57.712±0.00 65.463±0.00 1.543±0.00 13.079±7.25 31.990±25.87 21.506±18.38 14.456±0.00 27.695±22.18 15.393±12.82 17.204±13.11 N/A 49.589±29.68 64.264±21.14 23.247±8.14
ENST00000594761 N/A N/A N/A N/A N/A N/A 1.862±0.00 N/A N/A N/A N/A 12.804±0.00 N/A N/A
ENST00000595782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.195±0.00 N/A N/A N/A
ENST00000596799 N/A N/A N/A N/A N/A 1.253±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000769 CIL_000769_0001 CGP 19:17468769-17521288
CIL_000768 CIL_000768_0001 CGP 19:17511629-17553839

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005829 TAS cytosol
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0006098 IDA:IEA pentose-phosphate shunt
GO:0009051 IEA pentose-phosphate shunt, oxidative branch
GO:0017057 IDA:IEA 6-phosphogluconolactonase activity
GO:0044281 TAS small molecule metabolic process
GO:0048029 IEA monosaccharide binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021233 pgls 6-phosphogluconolactonase protein_coding Danio_rerio
ENSMUSG00000031807 Pgls 6-phosphogluconolactonase protein_coding Mus_musculus

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