C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000769_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130304-ENSG00000130313 CGP 9606 19:17468769-17521288
GeneTranscriptPositionBiotype
ENSG00000130304 (SLC27A1)
solute carrier family 27 (fatty acid transporter), member 1 		ENST00000252595 (SLC27A1-001) 17470444-17506168 protein_coding
ENST00000593701 (SLC27A1-008) 17488760-17500555 retained_intron
ENST00000594962 (SLC27A1-007) 17495415-17506168 retained_intron
ENST00000598424 (SLC27A1-002) 17470489-17504986 protein_coding
ENST00000598848 (SLC27A1-009) 17499870-17504601 processed_transcript
ENST00000599380 (SLC27A1-004) 17470528-17499398 nonsense_mediated_decay
ENST00000599965 (SLC27A1-010) 17500366-17504900 protein_coding
ENST00000600277 (SLC27A1-003) 17468769-17497314 nonsense_mediated_decay
ENST00000600297 (SLC27A1-005) 17470538-17489065 nonsense_mediated_decay
ENSG00000130313 (PGLS)
6-phosphogluconolactonase 		ENST00000252603 (PGLS-001) 17511629-17521288 protein_coding
ENST00000594761 (PGLS-004) 17511636-17521043 nonsense_mediated_decay
ENST00000595782 (PGLS-006) 17511865-17521288 protein_coding
ENST00000596799 (PGLS-002) 17511644-17513244 retained_intron
ENST00000598811 (PGLS-003) 17515742-17521030 retained_intron
ENST00000600923 (PGLS-005) 17511670-17517835 protein_coding
ENSG00000269161 (CTD-3131K8.3)
 ENST00000596192 (CTD-3131K8.3-001) 17518330-17520565 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_000769_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031808-ENSMUSG00000031807 CGP 10090 8:71568927-71601092
GeneTranscriptPositionBiotype
ENSMUSG00000031807 (Pgls)
6-phosphogluconolactonase 		ENSMUST00000034264 (Pgls-001) 71592176-71596269 protein_coding
ENSMUST00000123240 (Pgls-002) 71592211-71595665 retained_intron
ENSMUST00000127626 (Pgls-003) 71592184-71601092 nonsense_mediated_decay
ENSMUST00000138742 (Pgls-004) 71592237-71595111 protein_coding
ENSMUST00000143441 (Pgls-005) 71592291-71596269 protein_coding
ENSMUSG00000031808 (Slc27a1)
solute carrier family 27 (fatty acid transporter), member 1 		ENSMUST00000034267 (Slc27a1-201) 71568927-71586708 protein_coding
ENSMUSG00000043243 (Fam129c)
family with sequence similarity 129, member C 		ENSMUST00000124485 (Fam129c-002) 71597782-71607924 retained_intron
ENSMUST00000125339 (Fam129c-008) 71604961-71607933 protein_coding
ENSMUST00000125525 (Fam129c-006) 71602267-71602943 retained_intron
ENSMUST00000126559 (Fam129c-007) 71604744-71607571 nonsense_mediated_decay
ENSMUST00000127285 (Fam129c-003) 71602351-71607924 retained_intron
ENSMUST00000132891 (Fam129c-005) 71599911-71602234 retained_intron
ENSMUST00000141594 (Fam129c-004) 71599177-71601089 processed_transcript
ENSMUST00000143662 (Fam129c-001) 71597648-71607936 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000769_0001ENSG00000130304ENST00000252595ENST00000593701ENST00000594962ENST00000598424ENST00000598848ENST00000599380ENST00000599965ENST00000600277ENST00000600297ENSG00000130313ENST00000252603ENST00000594761ENST00000595782ENST00000596799ENST00000598811ENST00000600923ENSG00000269161ENST00000596192CIL_000769_0002ENSMUSG00000031807ENSMUST00000034264ENSMUST00000123240ENSMUST00000127626ENSMUST00000138742ENSMUST00000143441ENSMUSG00000031808ENSMUST00000034267ENSMUSG00000043243ENSMUST00000124485ENSMUST00000125339ENSMUST00000125525ENSMUST00000126559ENSMUST00000127285ENSMUST00000132891ENSMUST00000141594ENSMUST00000143662
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000769_0001ENSG00000130304ENST00000252595ENST00000593701ENST00000599380ENST00000600277ENSG00000130313ENST00000252603ENST00000594761ENST00000595782ENST00000596799ENSG00000269161ENST00000596192CIL_000769_0002ENSMUSG00000031807ENSMUST00000034264ENSMUST00000123240ENSMUST00000143441ENSMUSG00000031808ENSMUST00000034267ENSMUSG00000043243ENSMUST00000124485ENSMUST00000143662
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130304 ENST00000252595 13.632±0.00 9.899±0.00 N/A 10.319±0.00 20.860±0.00 7.037±0.00 2.336±0.00 3.466±0.00 1.130±0.00 2.480±1.69 N/A 10.899±8.06 6.765±2.15 7.339±1.36
ENST00000593701 N/A N/A N/A N/A N/A N/A 4.201±0.00 N/A N/A N/A N/A 4.973±0.00 N/A N/A
ENST00000594962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.160±0.00 1.552±0.00 N/A
ENST00000599965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600277 N/A N/A N/A N/A N/A N/A N/A 0.876±0.00 1.419±0.00 N/A 2.318±0.00 N/A N/A N/A
ENST00000600297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130313 ENST00000252603 57.712±0.00 65.463±0.00 1.543±0.00 13.079±7.25 31.990±25.87 21.506±18.38 14.456±0.00 27.695±22.18 15.393±12.82 17.204±13.11 N/A 49.589±29.68 64.264±21.14 23.247±8.14
ENST00000594761 N/A N/A N/A N/A N/A N/A 1.862±0.00 N/A N/A N/A N/A 12.804±0.00 N/A N/A
ENST00000595782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.195±0.00 N/A N/A N/A
ENST00000596799 N/A N/A N/A N/A N/A 1.253±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000269161 ENST00000596192 0.135±0.00 0.621±0.00 N/A 0.285±0.00 N/A 0.088±0.07 0.123±0.00 0.168±0.00 0.117±0.05 0.114±0.00 N/A 0.172±0.00 0.090±0.00 0.070±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031807 ENSMUST00000034264 54.563±2.64 184.026±23.74 24.339±3.05 39.191±26.55 64.432±30.69 73.798±9.37 23.822±5.90 47.985±4.65 41.912±6.94 44.305±2.12 14.023±2.00 90.030±28.79 24.576±7.60 18.070±8.46
ENSMUST00000123240 5.328±1.90 10.964±0.00 3.741±0.67 4.242±2.20 8.118±2.40 5.578±0.18 1.727±0.30 2.834±0.25 3.132±0.53 5.193±0.20 0.676±0.12 8.033±2.11 1.283±0.45 0.388±0.00
ENSMUST00000127626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.044±0.83 N/A N/A 21.411±1.19
ENSMUSG00000031808 ENSMUST00000034267 159.244±41.21 191.882±71.93 22.134±1.49 33.467±12.78 250.614±53.54 27.392±3.26 74.152±5.08 39.259±6.38 2.673±1.38 22.091±4.19 21.408±3.86 87.914±46.03 4.907±3.27 19.939±5.08
ENSMUSG00000043243 ENSMUST00000124485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.910±0.00 N/A 1.319±0.00 N/A
ENSMUST00000125339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143662 N/A N/A N/A N/A N/A N/A N/A N/A 3.198±0.00 N/A N/A N/A N/A N/A

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