C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 6-phosphogluconolactonase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252603 PGLS-001 ENSG00000130313 9606 + 19:17511629-17521288 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000252603
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000252603 57.712±0.00 65.463±0.00 1.543±0.00 13.079±7.25 31.990±25.87 21.506±18.38 14.456±0.00 27.695±22.18 15.393±12.82 17.204±13.11 49.589±29.68 64.264±21.14 23.247±8.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000769 CIL_000769_0001 CGP 19:17468769-17521288
CIL_000768 CIL_000768_0001 CGP 19:17511629-17553839

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 TAS cytosol
GO:0005975 TAS:IEA carbohydrate metabolic process
GO:0006098 IDA:IEA pentose-phosphate shunt
GO:0009051 IEA pentose-phosphate shunt, oxidative branch
GO:0017057 IDA:IEA 6-phosphogluconolactonase activity
GO:0044281 TAS small molecule metabolic process
GO:0048029 IEA monosaccharide binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034264 Pgls-001 protein_coding Mus_musculus 0 717
ENSMUST00000127626 Pgls-003 nonsense_mediated_decay Mus_musculus 0 616
ENSMUST00000138742 Pgls-004 protein_coding Mus_musculus 0 449
ENSMUST00000123240 Pgls-002 retained_intron Mus_musculus 0 296
ENSMUST00000143441 Pgls-005 protein_coding Mus_musculus 0 241

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