C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sterile alpha motif domain containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369886 SAMD10-001 ENSG00000130590 9606 - 20:63974113-63979642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369886
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369886 0.354±0.00 0.130±0.00 0.364±0.00 0.555±0.43 0.504±0.40 1.275±0.96 0.409±0.37 0.653±0.00 0.114±0.07 5.218±6.67 2.585±1.22 1.723±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F5 CIL_0004F5_0001 CGP 20:63939829-64048758

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060173 Samd10-001 protein_coding Mus_musculus 0 1007
ENSMUST00000183836 Samd10-002 nonsense_mediated_decay Mus_musculus 0 915
ENSMUST00000136249 Samd10-003 retained_intron Mus_musculus 0 446

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