C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein-O-mannosyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130714 POMT1 9606 + 9:131502902-131523806 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341012 POMT1-002 131502918-131523806 protein_coding
  ENST00000372220 POMT1-012 131518219-131523806 protein_coding
  ENST00000372228 POMT1-001 131502925-131523806 protein_coding
  ENST00000402686 POMT1-003 131502944-131523806 protein_coding
  ENST00000404875 POMT1-201 131502902-131523806 protein_coding
  ENST00000415075 POMT1-007 131502971-131512127 protein_coding
  ENST00000418774 POMT1-009 131502959-131507514 protein_coding
  ENST00000423007 POMT1-202 131502902-131523806 protein_coding
  ENST00000430619 POMT1-008 131503009-131510415 protein_coding
  ENST00000441334 POMT1-005 131502918-131513331 protein_coding
  ENST00000448212 POMT1-006 131502978-131510311 protein_coding
  ENST00000462375 POMT1-011 131508926-131513331 processed_transcript
  ENST00000467848 POMT1-013 131518768-131521404 processed_transcript
  ENST00000483472 POMT1-010 131502984-131506773 processed_transcript
  ENST00000485278 POMT1-004 131510500-131523798 processed_transcript
  ENST00000494883 POMT1-014 131521105-131522533 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000341012ENST00000372220ENST00000372228ENST00000402686ENST00000404875ENST00000423007ENST00000448212ENST00000467848ENST00000485278
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000341012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.697±0.00
ENST00000372220 N/A N/A N/A N/A 1.565±0.00 N/A N/A 3.811±0.00 N/A 9.681±0.00 N/A 16.880±0.00
ENST00000372228 N/A N/A N/A N/A 3.903±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000402686 2.456±0.00 N/A 2.138±0.00 N/A N/A 0.286±0.00 4.684±2.61 2.396±0.00 N/A 8.463±2.30 9.196±3.39 32.999±0.00
ENST00000404875 N/A N/A 5.945±0.00 4.640±0.00 N/A 4.109±0.00 N/A N/A N/A 2.312±0.00 N/A 10.206±0.00
ENST00000423007 N/A 1.503±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448212 N/A N/A N/A 3.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467848 N/A N/A N/A N/A N/A N/A N/A N/A 10.884±0.00 N/A N/A N/A
ENST00000485278 N/A N/A N/A 0.478±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0001 VISTA 9:131030990-131632063
CIL_0006ID CIL_0006ID_0001 CGP 9:131394093-131523806
CIL_0006IF CIL_0006IF_0001 CGP 9:131502902-131531268

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000030 IEA:TAS mannosyltransferase activity
GO:0001669 IEA acrosomal vesicle
GO:0004169 IEA dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005783 TAS endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0006493 IEA:TAS protein O-linked glycosylation
GO:0007275 TAS multicellular organismal development
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016529 IEA sarcoplasmic reticulum
GO:0030198 IEA extracellular matrix organization
GO:0035269 IEA protein O-linked mannosylation
GO:0046872 IEA metal ion binding
GO:0097502 IEA:TAS mannosylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067670 pomt1 protein-O-mannosyltransferase 1 protein_coding Danio_rerio
ENSMUSG00000039254 Pomt1 protein-O-mannosyltransferase 1 protein_coding Mus_musculus

Loading