C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein-O-mannosyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039254 Pomt1 10090 + 2:32236590-32255005 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036473 Pomt1-001 32236590-32255005 protein_coding
  ENSMUST00000123740 Pomt1-005 32237339-32243712 protein_coding
  ENSMUST00000126784 Pomt1-004 32236643-32237700 retained_intron
  ENSMUST00000129163 Pomt1-003 32236685-32255001 retained_intron
  ENSMUST00000132516 Pomt1-006 32244359-32250909 nonsense_mediated_decay
  ENSMUST00000132853 Pomt1-007 32245290-32248691 retained_intron
  ENSMUST00000138000 Pomt1-008 32247573-32251771 retained_intron
  ENSMUST00000146485 Pomt1-011 32237037-32243622 protein_coding
  ENSMUST00000151598 Pomt1-009 32251273-32252692 retained_intron
  ENSMUST00000154684 Pomt1-002 32236672-32243997 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036473ENSMUST00000129163
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036473 17.736±0.97 23.300±1.34 5.292±0.41 8.682±2.75 15.879±3.75 11.359±2.33 5.709±0.81 12.959±1.25 8.228±2.11 7.590±0.30 3.737±0.23 25.186±6.19 7.662±1.48 77.798±22.29
ENSMUST00000129163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.567±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586
CIL_0006ID CIL_0006ID_0002 CGP 2:32151082-32255005
CIL_0006IF CIL_0006IF_0002 CGP 2:32236590-32260159

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000030 IEA mannosyltransferase activity
GO:0001669 IDA acrosomal vesicle
GO:0004169 IEA dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005789 ISS endoplasmic reticulum membrane
GO:0006493 IEA protein O-linked glycosylation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016529 IDA sarcoplasmic reticulum
GO:0030198 IMP extracellular matrix organization
GO:0035269 IEA protein O-linked mannosylation
GO:0046872 IEA metal ion binding
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067670 pomt1 protein-O-mannosyltransferase 1 protein_coding Danio_rerio
ENSG00000130714 POMT1 protein-O-mannosyltransferase 1 protein_coding Homo_sapiens

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