C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regucalcin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130988 RGN 9606 + X:47078355-47093314 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000336169 RGN-002 47080859-47093310 protein_coding
  ENST00000352078 RGN-001 47078380-47093313 protein_coding
  ENST00000397180 RGN-201 47078355-47093314 protein_coding
  ENST00000457380 RGN-202 47078355-47093314 protein_coding
  ENST00000469346 RGN-004 47078425-47084961 processed_transcript
  ENST00000475448 RGN-003 47084538-47093308 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000336169ENST00000352078ENST00000397180ENST00000457380ENST00000475448
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000336169 N/A N/A N/A N/A N/A N/A 0.865±0.00 22.514±0.00 14.528±0.00 N/A N/A 0.557±0.00 1.471±0.67 0.696±0.00
ENST00000352078 0.407±0.00 1.193±0.00 2.759±0.00 4.369±1.93 2.537±1.69 0.938±0.00 4.171±0.00 15.331±9.27 17.095±14.70 2.701±1.92 0.937±0.32 4.758±2.60 5.278±2.75 1.543±0.31
ENST00000397180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A
ENST00000457380 N/A N/A N/A 1.675±0.74 0.790±0.42 N/A 1.347±1.01 25.437±0.00 0.439±0.00 0.985±0.00 0.254±0.00 0.984±0.89 2.130±0.00 N/A
ENST00000475448 1.301±0.00 1.117±0.00 N/A 8.828±0.00 N/A 0.919±0.63 2.227±0.00 8.068±0.00 28.332±0.00 N/A N/A 3.950±3.37 1.402±0.00 4.125±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G4 CIL_0005G4_0001 CGP X:46912276-47093314
CIL_0005GB CIL_0005GB_0001 CGP X:47078355-47145504

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004341 IDA gluconolactonase activity
GO:0005509 ISS calcium ion binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006874 ISS cellular calcium ion homeostasis
GO:0008270 IDA zinc ion binding
GO:0019853 IEA L-ascorbic acid biosynthetic process
GO:0030234 IEA enzyme regulator activity
GO:0032781 ISS positive regulation of ATPase activity
GO:0050848 ISS regulation of calcium-mediated signaling

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032200 rgn regucalcin protein_coding Danio_rerio
ENSMUSG00000023070 Rgn regucalcin protein_coding Mus_musculus

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