C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polypeptide N-acetylgalactosaminyltransferase 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000131386 GALNT15 9606 + 3:16174649-16231992 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339732 GALNT15-001 16174649-16229746 protein_coding
  ENST00000430410 GALNT15-004 16175665-16208645 nonsense_mediated_decay
  ENST00000437509 GALNT15-002 16174709-16231992 protein_coding
  ENST00000470031 GALNT15-003 16175417-16183253 processed_transcript
  ENST00000489467 GALNT15-005 16212698-16220249 retained_intron
  ENST00000617544 GALNT15-201 16174677-16229746 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339732ENST00000430410ENST00000470031ENST00000617544
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339732 N/A N/A 0.446±0.00 5.202±0.00 3.414±0.38 22.894±0.00 0.830±0.51 N/A 1.950±0.00 0.406±0.00 13.506±0.00 1.881±0.99 N/A N/A
ENST00000430410 N/A N/A N/A N/A N/A N/A N/A 1.224±0.00 N/A N/A N/A N/A N/A N/A
ENST00000470031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.233±0.00 N/A N/A N/A
ENST00000617544 101.829±0.00 3.315±0.00 N/A 13.129±0.00 4.871±0.00 25.432±24.93 5.175±0.00 2.355±2.28 0.503±0.00 4.078±0.00 0.412±0.00 0.299±0.01 15.740±10.50 2.616±1.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A7 CIL_0005A7_0001 CGP 3:15667236-16231992
CIL_0004HN CIL_0004HN_0001 CGP 3:16174649-16264972

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0004653 IEA polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0016757 IEA transferase activity, transferring glycosyl groups
GO:0030133 IDA transport vesicle
GO:0030246 IEA carbohydrate binding
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042778 galnt10 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) protein_coding Danio_rerio
ENSDARG00000087581 CABZ01081673.1 polypeptide N-acetylgalactosaminyltransferase 15 protein_coding Danio_rerio
ENSDARG00000088812 CABZ01075242.1 polypeptide N-acetylgalactosaminyltransferase 15 protein_coding Danio_rerio
ENSMUSG00000021903 Galnt15 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15 protein_coding Mus_musculus

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