C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005A7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000206560-ENSG00000131386 CGP 9606 3:15667236-16231992
GeneTranscriptPositionBiotype
ENSG00000131386 (GALNT15)
polypeptide N-acetylgalactosaminyltransferase 15 		ENST00000339732 (GALNT15-001) 16174649-16229746 protein_coding
ENST00000430410 (GALNT15-004) 16175665-16208645 nonsense_mediated_decay
ENST00000437509 (GALNT15-002) 16174709-16231992 protein_coding
ENST00000470031 (GALNT15-003) 16175417-16183253 processed_transcript
ENST00000489467 (GALNT15-005) 16212698-16220249 retained_intron
ENST00000617544 (GALNT15-201) 16174677-16229746 protein_coding
ENSG00000206560 (ANKRD28)
ankyrin repeat domain 28 		ENST00000383777 (ANKRD28-201) 15667236-15756551 protein_coding
ENST00000399451 (ANKRD28-003) 15667236-15859771 protein_coding
ENST00000412318 (ANKRD28-001) 15667239-15859422 nonsense_mediated_decay
ENST00000439830 (ANKRD28-002) 15737039-15859469 nonsense_mediated_decay
ENST00000451422 (ANKRD28-007) 15677536-15796506 nonsense_mediated_decay
ENST00000460278 (ANKRD28-010) 15724397-15756548 processed_transcript
ENST00000461696 (ANKRD28-009) 15781437-15797979 processed_transcript
ENST00000462657 (ANKRD28-013) 15689840-15696231 retained_intron
ENST00000463533 (ANKRD28-014) 15679301-15686453 retained_intron
ENST00000476472 (ANKRD28-011) 15721101-15756547 processed_transcript
ENST00000479043 (ANKRD28-015) 15676596-15677606 retained_intron
ENST00000492895 (ANKRD28-012) 15709668-15721122 processed_transcript
ENST00000497037 (ANKRD28-004) 15670110-15798184 processed_transcript
ENST00000498524 (ANKRD28-006) 15683742-15796826 retained_intron
ENST00000498713 (ANKRD28-008) 15669792-15676223 processed_transcript
ENST00000624145 (ANKRD28-202) 15667236-15798184 protein_coding
ENSG00000224728 (AC090945.1)
 ENST00000413639 (AC090945.1-001) 15878047-15879571 processed_pseudogene
ENSG00000263740 (RN7SL4P)
RNA, 7SL, cytoplasmic 4, pseudogene 		ENST00000584058 (RN7SL4P-201) 15738515-15738809 misc_RNA
ENSG00000264354 (MIR3134)
microRNA 3134 		ENST00000579433 (MIR3134-201) 15697298-15697371 miRNA
ENSG00000270409 (RP11-44D5.1)
 ENST00000604625 (RP11-44D5.1-001) 15732252-15733404 transcribed_unprocessed_pseudogene
ENST00000605733 (RP11-44D5.1-002) 15732827-15733470 processed_transcript
ENSG00000279465 (RP11-44D5.2)
 ENST00000624280 (RP11-44D5.2-001) 15731877-15732536 TEC

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0005A7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014496-ENSMUSG00000021903 CGP 10090 14:31700015-32062197
GeneTranscriptPositionBiotype
ENSMUSG00000014496 (Ankrd28)
ankyrin repeat domain 28 		ENSMUST00000014640 (Ankrd28-201) 31700015-31830415 protein_coding
ENSMUSG00000021903 (Galnt15)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15 		ENSMUST00000022460 (Galnt15-001) 32028989-32062197 protein_coding
ENSMUST00000164208 (Galnt15-002) 32029410-32060227 protein_coding
ENSMUSG00000046005 (D830044D21Rik)
RIKEN cDNA D830044D21 gene 		ENSMUST00000143315 (D830044D21Rik-001) 31906528-31929879 lincRNA
ENSMUSG00000093191 (Gm22876)
predicted gene, 22876 		ENSMUST00000175450 (Gm22876-201) 31836884-31837181 misc_RNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005A7_0001ENSG00000131386ENST00000339732ENST00000430410ENST00000437509ENST00000470031ENST00000489467ENST00000617544ENSG00000206560ENST00000383777ENST00000399451ENST00000412318ENST00000439830ENST00000451422ENST00000460278ENST00000461696ENST00000462657ENST00000463533ENST00000476472ENST00000479043ENST00000492895ENST00000497037ENST00000498524ENST00000498713ENST00000624145ENSG00000224728ENST00000413639ENSG00000263740ENST00000584058ENSG00000264354ENST00000579433ENSG00000270409ENST00000604625ENST00000605733ENSG00000279465ENST00000624280CIL_0005A7_0002ENSMUSG00000014496ENSMUST00000014640ENSMUSG00000021903ENSMUST00000022460ENSMUST00000164208ENSMUSG00000046005ENSMUST00000143315ENSMUSG00000093191ENSMUST00000175450
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005A7_0001ENSG00000131386ENST00000339732ENST00000430410ENST00000470031ENST00000617544ENSG00000206560ENST00000383777ENST00000399451ENST00000412318ENST00000451422ENST00000461696ENST00000463533ENST00000497037ENST00000498524ENST00000498713ENSG00000224728ENST00000413639ENSG00000263740ENST00000584058ENSG00000264354ENST00000579433ENSG00000270409ENST00000604625ENST00000605733ENSG00000279465ENST00000624280CIL_0005A7_0002ENSMUSG00000014496ENSMUST00000014640ENSMUSG00000021903ENSMUST00000022460ENSMUST00000164208ENSMUSG00000046005ENSMUST00000143315ENSMUSG00000093191ENSMUST00000175450
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131386 ENST00000339732 N/A N/A 0.446±0.00 5.202±0.00 3.414±0.38 22.894±0.00 0.830±0.51 N/A 1.950±0.00 0.406±0.00 13.506±0.00 1.881±0.99 N/A N/A
ENST00000430410 N/A N/A N/A N/A N/A N/A N/A 1.224±0.00 N/A N/A N/A N/A N/A N/A
ENST00000437509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.233±0.00 N/A N/A N/A
ENST00000489467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617544 101.829±0.00 3.315±0.00 N/A 13.129±0.00 4.871±0.00 25.432±24.93 5.175±0.00 2.355±2.28 0.503±0.00 4.078±0.00 0.412±0.00 0.299±0.01 15.740±10.50 2.616±1.34
ENSG00000206560 ENST00000383777 N/A 0.925±0.00 N/A N/A 1.341±0.00 1.125±0.00 N/A 2.017±0.00 0.520±0.00 2.065±0.00 N/A 1.272±0.06 0.581±0.00 6.882±0.15
ENST00000399451 5.097±0.00 1.213±0.00 N/A 5.556±0.00 2.616±0.00 2.668±0.22 2.912±0.75 2.195±0.14 1.612±0.13 1.793±0.40 5.443±4.50 2.145±1.55 1.706±0.00 1.378±0.00
ENST00000412318 N/A N/A N/A N/A N/A N/A N/A 1.393±0.00 N/A 0.954±0.00 4.383±2.54 1.619±0.71 0.782±0.08 N/A
ENST00000439830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451422 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.743±0.00 3.971±0.00 N/A 2.101±0.00 N/A
ENST00000460278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461696 N/A N/A N/A N/A N/A 4.183±0.00 N/A N/A N/A 5.691±0.00 4.455±0.00 8.787±0.00 N/A N/A
ENST00000462657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.523±0.00 8.775±0.00 46.182±0.00
ENST00000476472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497037 N/A N/A N/A N/A N/A 2.412±0.00 N/A N/A N/A N/A N/A N/A N/A 6.860±0.00
ENST00000498524 N/A N/A 1.676±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498713 N/A N/A 7.650±0.00 N/A N/A 10.427±0.00 N/A N/A 6.931±0.00 6.447±0.00 N/A N/A N/A N/A
ENST00000624145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224728 ENST00000413639 0.040±0.00 0.029±0.00 0.368±0.00 0.255±0.12 0.182±0.17 0.155±0.14 0.013±0.00 0.077±0.00 0.154±0.00 0.037±0.00 0.200±0.00 0.246±0.14 0.037±0.01 0.354±0.03
ENSG00000263740 ENST00000584058 0.089±0.00 1.537±0.00 91.402±0.00 0.687±0.00 0.317±0.00 93.947±93.76 26.562±26.18 111.593±111.38 285.137±0.00 85.013±0.00 194.785±0.00 38.010±0.00 N/A 0.181±0.00
ENSG00000264354 ENST00000579433 N/A N/A N/A 1.127±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270409 ENST00000604625 N/A N/A 0.450±0.00 0.161±0.00 N/A 0.096±0.00 0.037±0.02 0.290±0.00 0.176±0.00 0.064±0.00 N/A 0.075±0.05 0.031±0.00 N/A
ENST00000605733 0.172±0.00 0.447±0.00 N/A 0.513±0.00 0.391±0.00 0.096±0.07 0.164±0.00 0.159±0.00 0.260±0.00 0.153±0.00 0.039±0.00 0.151±0.07 0.041±0.00 0.182±0.10
ENSG00000279465 ENST00000624280 0.043±0.00 0.157±0.00 0.157±0.00 N/A 0.216±0.00 0.306±0.00 N/A 0.156±0.00 0.402±0.00 0.145±0.00 0.077±0.00 0.104±0.05 N/A 0.048±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014496 ENSMUST00000014640 3.650±1.32 2.252±0.47 1.239±0.38 5.203±3.50 2.999±0.42 2.852±0.76 3.147±0.64 4.004±0.31 2.104±1.09 2.815±1.38 2.761±0.85 3.821±1.17 3.582±1.92 3.036±1.20
ENSMUSG00000021903 ENSMUST00000022460 14.355±5.90 2.562±1.02 7.951±1.55 0.198±0.16 9.786±2.17 1.791±0.44 4.412±0.16 0.921±0.39 0.114±0.10 5.081±1.48 1.956±0.42 13.739±4.60 0.169±0.07 0.137±0.11
ENSMUST00000164208 N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A 0.042±0.03 N/A 0.799±0.04 2.323±0.00 0.076±0.07 0.105±0.03
ENSMUSG00000046005 ENSMUST00000143315 0.029±0.02 N/A N/A 0.057±0.02 0.041±0.02 N/A 0.024±0.01 0.037±0.01 0.005±0.00 0.025±0.00 N/A 0.055±0.03 0.027±0.02 0.066±0.01
ENSMUSG00000093191 ENSMUST00000175450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00

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