C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004HN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131386-ENSG00000154813 CGP 9606 3:16174649-16264972
GeneTranscriptPositionBiotype
ENSG00000131386 (GALNT15)
polypeptide N-acetylgalactosaminyltransferase 15 		ENST00000339732 (GALNT15-001) 16174649-16229746 protein_coding
ENST00000430410 (GALNT15-004) 16175665-16208645 nonsense_mediated_decay
ENST00000437509 (GALNT15-002) 16174709-16231992 protein_coding
ENST00000470031 (GALNT15-003) 16175417-16183253 processed_transcript
ENST00000489467 (GALNT15-005) 16212698-16220249 retained_intron
ENST00000617544 (GALNT15-201) 16174677-16229746 protein_coding
ENSG00000154813 (DPH3)
diphthamide biosynthesis 3 		ENST00000285082 (DPH3-003) 16259910-16264777 processed_transcript
ENST00000383775 (DPH3-002) 16257979-16264969 protein_coding
ENST00000462982 (DPH3-004) 16260424-16264587 processed_transcript
ENST00000488423 (DPH3-001) 16257978-16264972 protein_coding
CIL_0004HN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021903-ENSMUSG00000021905 CGP 10090 14:32028989-32085692
GeneTranscriptPositionBiotype
ENSMUSG00000021903 (Galnt15)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15 		ENSMUST00000022460 (Galnt15-001) 32028989-32062197 protein_coding
ENSMUST00000164208 (Galnt15-002) 32029410-32060227 protein_coding
ENSMUSG00000021905 (Dph3)
diphthamine biosynthesis 3 		ENSMUST00000022461 (Dph3-002) 32080566-32085609 protein_coding
ENSMUST00000067955 (Dph3-001) 32080569-32085609 protein_coding
ENSMUST00000112000 (Dph3-004) 32084696-32085609 protein_coding
ENSMUST00000112001 (Dph3-003) 32080569-32085609 nonsense_mediated_decay
ENSMUST00000124303 (Dph3-005) 32082758-32085609 protein_coding
ENSMUST00000144149 (Dph3-006) 32082876-32085286 retained_intron
ENSMUST00000167796 (Dph3-007) 32082872-32085692 processed_transcript
ENSMUSG00000021906 (Oxnad1)
oxidoreductase NAD-binding domain containing 1 		ENSMUST00000022462 (Oxnad1-001) 32085413-32103202 protein_coding
ENSMUST00000164396 (Oxnad1-012) 32100818-32102282 retained_intron
ENSMUST00000164868 (Oxnad1-002) 32085811-32103202 nonsense_mediated_decay
ENSMUST00000165523 (Oxnad1-005) 32085787-32099631 nonsense_mediated_decay
ENSMUST00000166810 (Oxnad1-011) 32085374-32091676 protein_coding
ENSMUST00000168986 (Oxnad1-008) 32085834-32096624 protein_coding
ENSMUST00000169078 (Oxnad1-003) 32085834-32100042 retained_intron
ENSMUST00000169649 (Oxnad1-004) 32085877-32096584 protein_coding
ENSMUST00000170519 (Oxnad1-009) 32095399-32102655 nonsense_mediated_decay
ENSMUST00000170600 (Oxnad1-007) 32085826-32099500 protein_coding
ENSMUST00000171598 (Oxnad1-006) 32085376-32096544 protein_coding
ENSMUST00000171849 (Oxnad1-010) 32095462-32102852 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HN_0001ENSG00000131386ENST00000339732ENST00000430410ENST00000437509ENST00000470031ENST00000489467ENST00000617544ENSG00000154813ENST00000285082ENST00000383775ENST00000462982ENST00000488423CIL_0004HN_0002ENSMUSG00000021903ENSMUST00000022460ENSMUST00000164208ENSMUSG00000021905ENSMUST00000022461ENSMUST00000067955ENSMUST00000112000ENSMUST00000112001ENSMUST00000124303ENSMUST00000144149ENSMUST00000167796ENSMUSG00000021906ENSMUST00000022462ENSMUST00000164396ENSMUST00000164868ENSMUST00000165523ENSMUST00000166810ENSMUST00000168986ENSMUST00000169078ENSMUST00000169649ENSMUST00000170519ENSMUST00000170600ENSMUST00000171598ENSMUST00000171849
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004HN_0001ENSG00000131386ENST00000339732ENST00000430410ENST00000470031ENST00000617544ENSG00000154813ENST00000285082ENST00000383775ENST00000462982ENST00000488423CIL_0004HN_0002ENSMUSG00000021903ENSMUST00000022460ENSMUST00000164208ENSMUSG00000021905ENSMUST00000022461ENSMUST00000067955ENSMUST00000112001ENSMUST00000124303ENSMUST00000144149ENSMUST00000167796ENSMUSG00000021906ENSMUST00000022462ENSMUST00000165523ENSMUST00000169078ENSMUST00000169649
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131386 ENST00000339732 N/A N/A 0.446±0.00 5.202±0.00 3.414±0.38 22.894±0.00 0.830±0.51 N/A 1.950±0.00 0.406±0.00 13.506±0.00 1.881±0.99 N/A N/A
ENST00000430410 N/A N/A N/A N/A N/A N/A N/A 1.224±0.00 N/A N/A N/A N/A N/A N/A
ENST00000437509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.233±0.00 N/A N/A N/A
ENST00000489467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617544 101.829±0.00 3.315±0.00 N/A 13.129±0.00 4.871±0.00 25.432±24.93 5.175±0.00 2.355±2.28 0.503±0.00 4.078±0.00 0.412±0.00 0.299±0.01 15.740±10.50 2.616±1.34
ENSG00000154813 ENST00000285082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.104±0.00
ENST00000383775 2.088±0.00 1.196±0.00 N/A N/A 1.543±0.67 3.784±0.00 1.151±0.27 0.964±0.69 0.883±0.54 1.320±0.21 1.165±0.67 2.176±1.13 2.547±1.53 1.537±0.04
ENST00000462982 N/A N/A N/A N/A N/A N/A N/A N/A 2.711±0.00 5.769±0.00 N/A N/A 4.622±0.23 N/A
ENST00000488423 3.130±0.00 3.145±0.00 1.046±0.00 2.222±0.39 2.783±1.59 1.529±0.38 2.231±2.03 3.427±2.36 2.301±0.08 2.347±0.66 3.786±2.68 1.649±0.36 1.772±0.53 3.617±2.61
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021903 ENSMUST00000022460 14.355±5.90 2.562±1.02 7.951±1.55 0.198±0.16 9.786±2.17 1.791±0.44 4.412±0.16 0.921±0.39 0.114±0.10 5.081±1.48 1.956±0.42 13.739±4.60 0.169±0.07 0.137±0.11
ENSMUST00000164208 N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A 0.042±0.03 N/A 0.799±0.04 2.323±0.00 0.076±0.07 0.105±0.03
ENSMUSG00000021905 ENSMUST00000022461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.654±0.00 N/A N/A N/A
ENSMUST00000067955 4.680±0.78 3.617±0.68 5.967±0.21 7.233±1.05 3.325±0.50 4.022±0.90 4.489±0.66 4.132±0.75 3.527±1.20 3.961±1.26 3.906±0.51 5.385±0.87 3.048±0.47 2.783±0.12
ENSMUST00000112000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.217±0.49 N/A 1.232±0.00
ENSMUST00000124303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.784±4.66 N/A
ENSMUST00000144149 N/A N/A 10.785±0.00 N/A 6.705±0.00 10.561±3.15 N/A N/A 7.069±0.00 N/A N/A 13.024±1.35 19.558±3.63 9.046±0.00
ENSMUST00000167796 N/A N/A N/A N/A 11.217±2.69 N/A N/A 11.940±0.92 21.224±0.00 N/A 40.813±2.91 N/A 24.003±13.38 31.956±9.36
ENSMUSG00000021906 ENSMUST00000022462 6.032±1.06 4.167±1.59 6.120±0.01 4.536±1.51 3.608±1.31 3.880±1.24 14.707±1.04 10.229±0.92 7.509±2.47 2.913±0.99 10.581±0.83 4.031±1.21 5.214±2.48 7.264±1.04
ENSMUST00000164396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165523 8.806±0.77 7.821±0.78 N/A N/A 5.940±1.08 6.170±1.15 13.816±1.90 13.337±4.23 7.483±2.06 N/A N/A N/A N/A N/A
ENSMUST00000166810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169078 N/A 2.981±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.490±0.08 N/A N/A
ENSMUST00000169649 N/A 9.536±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171598 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171849 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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