C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat and KH domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360839 ANKHD1-001 ENSG00000131503 9606 + 5:140401814-140539856 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLungMuscleOvaryENST00000360839
Transcript ID Bladder Brain Breast Heart Kidney Lung Muscle Ovary
ENST00000360839 2.540±0.00 2.344±0.00 2.484±0.00 1.152±0.00 3.249±0.00 2.652±0.00 2.277±0.00 4.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZO CIL_0006ZO_0001 CGP 5:140360202-140539856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006205 Ankhd1-001 nonsense_mediated_decay Mus_musculus 0 10680
ENSMUST00000142977 Ankhd1-015 nonsense_mediated_decay Mus_musculus 0 9989
ENSMUST00000155329 Ankhd1-014 protein_coding Mus_musculus 0 9369
ENSMUST00000037072 Ankhd1-016 protein_coding Mus_musculus 0 4143
ENSMUST00000140061 Ankhd1-018 protein_coding Mus_musculus 0 1258
ENSMUST00000152060 Ankhd1-005 protein_coding Mus_musculus 0 808
ENSMUST00000134146 Ankhd1-004 protein_coding Mus_musculus 0 760
ENSMUST00000116653 Ankhd1-017 protein_coding Mus_musculus 0 750
ENSDART00000112410 ankhd1-201 protein_coding Danio_rerio 0 741
ENSDART00000147947 ankhd1-001 protein_coding Danio_rerio 0 741
ENSMUST00000142780 Ankhd1-006 processed_transcript Mus_musculus 0 715
ENSMUST00000136030 Ankhd1-007 protein_coding Mus_musculus 0 693
ENSMUST00000130035 Ankhd1-009 nonsense_mediated_decay Mus_musculus 0 464
ENSMUST00000143966 Ankhd1-013 retained_intron Mus_musculus 0 442
ENSMUST00000153612 Ankhd1-010 nonsense_mediated_decay Mus_musculus 0 388
ENSMUST00000156424 Ankhd1-008 retained_intron Mus_musculus 0 287

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