C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132274 TRIM22 9606 + 11:5689689-5737089 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000379965 TRIM22-001 5689689-5710863 protein_coding
  ENST00000414641 TRIM22-005 5691027-5698476 protein_coding
  ENST00000414897 TRIM22-007 5696502-5709137 nonsense_mediated_decay
  ENST00000425490 TRIM22-003 5689697-5698406 protein_coding
  ENST00000429063 TRIM22-010 5708208-5737089 protein_coding
  ENST00000444844 TRIM22-011 5708208-5737089 protein_coding
  ENST00000450670 TRIM22-008 5706594-5715043 protein_coding
  ENST00000454828 TRIM22-006 5689880-5709163 protein_coding
  ENST00000460454 TRIM22-004 5689821-5697013 retained_intron
  ENST00000480395 TRIM22-002 5696492-5709447 retained_intron
  ENST00000493494 TRIM22-009 5706550-5709317 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379965ENST00000414897ENST00000425490ENST00000450670ENST00000454828ENST00000460454ENST00000480395ENST00000493494
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379965 N/A 11.308±0.00 3.423±0.00 2.506±0.00 13.821±0.00 N/A 2.864±0.00 2.660±1.28 5.324±4.08 20.150±4.72 0.951±0.17 4.943±2.17 2.740±1.07 2.901±0.54
ENST00000414897 8.030±0.00 N/A N/A N/A N/A N/A N/A 8.524±0.00 N/A N/A 3.042±0.00 N/A N/A 8.033±0.00
ENST00000425490 N/A N/A N/A N/A N/A N/A 3.923±0.00 N/A 11.400±0.00 N/A 1.055±0.00 N/A N/A N/A
ENST00000450670 N/A N/A 8.275±0.00 6.242±0.13 N/A 16.628±0.00 6.818±0.00 7.736±0.00 N/A N/A 1.951±0.00 N/A N/A N/A
ENST00000454828 N/A N/A N/A N/A N/A 6.898±0.00 N/A 3.688±0.00 N/A N/A N/A N/A N/A N/A
ENST00000460454 N/A N/A N/A N/A N/A N/A 3.854±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000480395 N/A 11.576±0.00 2.493±0.00 1.338±0.00 7.583±2.92 N/A N/A 2.849±0.00 6.282±0.00 13.485±0.00 0.407±0.00 4.127±0.67 N/A 3.033±0.00
ENST00000493494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.022±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0003714 TAS transcription corepressor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006955 TAS immune response
GO:0008270 IEA zinc ion binding
GO:0009615 TAS response to virus
GO:0016032 IEA viral process
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0043123 IDA positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046872 IEA metal ion binding
GO:0051091 IDA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 IDA positive regulation of NF-kappaB transcription factor activity
GO:0051607 IEA defense response to virus
GO:0070206 IDA protein trimerization

Homologs

No Homologs available.

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