C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480395 TRIM22-002 ENSG00000132274 9606 + 11:5696492-5709447 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryTestisENST00000480395
Transcript ID Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Testis
ENST00000480395 11.576±0.00 2.493±0.00 1.338±0.00 7.583±2.92 2.849±0.00 6.282±0.00 13.485±0.00 0.407±0.00 4.127±0.67 3.033±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051795 Trim5-201 protein_coding Mus_musculus 0.00004 55
ENSMUST00000098179 Trim5-001 protein_coding Mus_musculus 0.00004 55
ENSMUST00000138557 Trim5-002 nonsense_mediated_decay Mus_musculus 0.00004 55
ENSMUST00000059037 Trim12c-001 protein_coding Mus_musculus 0.00004 55
ENSMUST00000094805 Ccdc8-001 protein_coding Mus_musculus 0.00004 55

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