C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HERV-H LTR-associating 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132297 HHLA1 9606 - 8:132061486-132111159 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000414222 HHLA1-201 132061486-132105265 protein_coding
  ENST00000434736 HHLA1-001 132069675-132111159 protein_coding
  ENST00000473291 HHLA1-002 132063785-132081104 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000414222ENST00000473291
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000414222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A
ENST00000473291 0.644±0.00 2.129±0.00 0.051±0.00 3.223±3.20 0.716±0.65 0.359±0.15 0.496±0.00 0.935±0.91 0.719±0.34 0.308±0.22 0.232±0.00 1.156±1.36 0.815±0.75 2.613±1.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006P8 CIL_0006P8_0002 CGP 8:132024238-132111159
CIL_0006FU CIL_0006FU_0002 CGP 8:132061486-132480953

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087842 HHLA1 HERV-H LTR-associating 1 protein_coding Danio_rerio
ENSMUSG00000072511 Hhla1 HERV-H LTR-associating 1 protein_coding Mus_musculus

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