C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006P8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000001721-ENSDARG00000087842 CGP 7955 2:43043670-43082550
GeneTranscriptPositionBiotype
ENSDARG00000001721 (oc90)
otoconin 90 		ENSDART00000098303 (oc90-001) 43043670-43061471 protein_coding
ENSDART00000139945 (oc90-002) 43054384-43059231 protein_coding
ENSDART00000144317 (oc90-003) 43054487-43059737 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0006P8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000258417-ENSG00000132297 CGP 9606 8:132024238-132111159
GeneTranscriptPositionBiotype
ENSG00000132297 (HHLA1)
HERV-H LTR-associating 1 		ENST00000414222 (HHLA1-201) 132061486-132105265 protein_coding
ENST00000434736 (HHLA1-001) 132069675-132111159 protein_coding
ENST00000473291 (HHLA1-002) 132063785-132081104 retained_intron
ENSG00000253117 (OC90)
otoconin 90 		ENST00000254627 (OC90-001) 132024220-132059380 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0006P8_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015001-ENSMUSG00000072511 CGP 10090 15:65876053-65976804
GeneTranscriptPositionBiotype
ENSMUSG00000015001 (Oc90)
otoconin 90 		ENSMUST00000060522 (Oc90-001) 65876053-65912397 protein_coding
ENSMUST00000079776 (Oc90-002) 65876053-65912254 protein_coding
ENSMUST00000135442 (Oc90-004) 65876392-65892438 protein_coding
ENSMUST00000147776 (Oc90-005) 65876520-65889638 protein_coding
ENSMUST00000156996 (Oc90-003) 65876053-65901561 protein_coding
ENSMUSG00000072511 (Hhla1)
HERV-H LTR-associating 1 		ENSMUST00000100584 (Hhla1-001) 65922443-65976804 protein_coding
ENSMUSG00000092454 (Gm2991)
predicted pseudogene 2991 		ENSMUST00000173338 (Gm2991-001) 65928454-65928933 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006P8_0001ENSDARG00000001721ENSDART00000098303ENSDART00000139945ENSDART00000144317CIL_0006P8_0002ENSG00000132297ENST00000414222ENST00000434736ENST00000473291ENSG00000253117ENST00000254627CIL_0006P8_0003ENSMUSG00000015001ENSMUST00000060522ENSMUST00000079776ENSMUST00000135442ENSMUST00000147776ENSMUST00000156996ENSMUSG00000072511ENSMUST00000100584ENSMUSG00000092454ENSMUST00000173338
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006P8_0001ENSDARG00000001721ENSDART00000098303ENSDART00000144317CIL_0006P8_0002ENSG00000132297ENST00000414222ENST00000473291ENSG00000253117ENST00000254627CIL_0006P8_0003ENSMUSG00000015001ENSMUST00000060522ENSMUST00000079776ENSMUST00000135442ENSMUST00000147776ENSMUST00000156996ENSMUSG00000072511ENSMUST00000100584ENSMUSG00000092454ENSMUST00000173338
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000001721 ENSDART00000098303 N/A N/A N/A 0.077±0.02 N/A N/A 0.038±0.02 0.156±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000139945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144317 N/A N/A N/A 0.209±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132297 ENST00000414222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A
ENST00000434736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473291 0.644±0.00 2.129±0.00 0.051±0.00 3.223±3.20 0.716±0.65 0.359±0.15 0.496±0.00 0.935±0.91 0.719±0.34 0.308±0.22 0.232±0.00 1.156±1.36 0.815±0.75 2.613±1.60
ENSG00000253117 ENST00000254627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.01 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015001 ENSMUST00000060522 N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 0.004±0.00 0.107±0.01
ENSMUST00000079776 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.129±0.06
ENSMUST00000135442 N/A N/A N/A 0.031±0.01 N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A 0.161±0.00
ENSMUST00000147776 N/A N/A N/A N/A N/A N/A N/A 0.075±0.04 N/A N/A N/A 0.077±0.00 0.055±0.05 0.084±0.00
ENSMUST00000156996 N/A N/A 0.010±0.00 0.038±0.01 N/A N/A N/A 0.036±0.01 0.004±0.00 N/A N/A 0.055±0.00 0.061±0.00 0.095±0.08
ENSMUSG00000072511 ENSMUST00000100584 N/A N/A N/A 0.011±0.00 N/A N/A N/A 0.023±0.01 N/A N/A N/A 0.106±0.05 0.011±0.00 0.050±0.00
ENSMUSG00000092454 ENSMUST00000173338 0.075±0.00 0.238±0.09 0.024±0.00 0.011±0.00 0.067±0.00 0.139±0.00 0.073±0.01 0.069±0.00 0.111±0.09 0.082±0.01 N/A N/A 0.092±0.00 0.192±0.12

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