C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: popeye domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132429 POPDC3 9606 - 6:105158280-105179995 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254765 POPDC3-001 105158280-105179860 protein_coding
  ENST00000429112 POPDC3-004 105158581-105160121 protein_coding
  ENST00000474760 POPDC3-002 105158360-105179995 processed_transcript
  ENST00000489134 POPDC3-003 105158300-105163765 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254765ENST00000429112ENST00000474760ENST00000489134
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254765 0.056±0.00 0.238±0.00 1.496±0.00 2.433±0.00 0.183±0.00 7.039±5.28 0.053±0.00 N/A N/A 21.083±12.12 0.066±0.00 0.202±0.03 2.083±0.25
ENST00000429112 0.093±0.00 0.193±0.00 N/A N/A N/A N/A N/A 1.366±0.00 N/A N/A N/A N/A N/A
ENST00000474760 0.032±0.00 N/A 3.495±2.23 2.381±0.00 0.184±0.00 3.184±1.30 0.063±0.00 0.258±0.00 0.237±0.00 24.909±6.03 0.229±0.04 0.437±0.21 1.930±0.57
ENST00000489134 N/A N/A N/A 0.490±0.00 N/A N/A N/A N/A 0.139±0.00 5.454±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089G CIL_00089G_0001 VISTA 6:104925514-105527976
CIL_00082P CIL_00082P_0001 VISTA 6:105003758-105605764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 NAS integral component of membrane
GO:0042391 IEA regulation of membrane potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058551 popdc3 popeye domain containing 3 protein_coding Danio_rerio
ENSMUSG00000019848 Popdc3 popeye domain containing 3 protein_coding Mus_musculus

Loading