C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: popeye domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019848 Popdc3 10090 + 10:45178098-45318452 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019994 Popdc3-001 45289305-45318452 protein_coding
  ENSMUST00000161803 Popdc3-002 45289402-45318117 protein_coding
  ENSMUST00000175658 Popdc3-003 45178098-45315114 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019994ENSMUST00000161803ENSMUST00000175658
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019994 0.122±0.03 0.105±0.05 2.561±0.10 0.155±0.10 1.740±0.93 N/A 4.231±0.60 0.096±0.02 0.027±0.02 2.933±0.64 10.963±1.25 0.130±0.08 0.665±1.04 0.024±0.01
ENSMUST00000161803 N/A 0.075±0.04 1.222±0.33 0.105±0.02 0.499±0.14 0.071±0.04 1.570±0.44 0.087±0.03 0.015±0.00 0.962±0.35 8.529±1.46 0.131±0.09 0.200±0.26 0.077±0.00
ENSMUST00000175658 N/A N/A N/A N/A N/A 0.095±0.00 N/A 0.122±0.00 N/A N/A N/A 0.173±0.04 N/A 0.030±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082P CIL_00082P_0002 VISTA 10:44839829-45441705
CIL_00089G CIL_00089G_0002 VISTA 10:44928613-45531786
CIL_0004CC CIL_0004CC_0002 CGP 10:45178098-45369708

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0042391 IGI regulation of membrane potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058551 popdc3 popeye domain containing 3 protein_coding Danio_rerio
ENSG00000132429 POPDC3 popeye domain containing 3 protein_coding Homo_sapiens

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