C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fidgetin-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132436 FIGNL1 9606 - 7:50444128-50542535 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356889 FIGNL1-002 50444128-50450324 protein_coding
  ENST00000395556 FIGNL1-001 50444133-50450350 protein_coding
  ENST00000419119 FIGNL1-004 50445142-50449724 protein_coding
  ENST00000420829 FIGNL1-008 50447128-50450336 protein_coding
  ENST00000422854 FIGNL1-010 50446981-50450368 protein_coding
  ENST00000433017 FIGNL1-003 50444477-50450390 protein_coding
  ENST00000435566 FIGNL1-011 50446787-50450388 protein_coding
  ENST00000436590 FIGNL1-006 50446912-50450090 protein_coding
  ENST00000440350 FIGNL1-007 50446995-50449695 protein_coding
  ENST00000448788 FIGNL1-009 50447183-50450336 protein_coding
  ENST00000611938 FIGNL1-201 50444129-50450390 protein_coding
  ENST00000613602 FIGNL1-202 50444129-50542535 protein_coding
  ENST00000615084 FIGNL1-203 50444129-50450390 protein_coding
  ENST00000617389 FIGNL1-204 50444129-50450390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356889ENST00000395556ENST00000419119ENST00000422854ENST00000433017ENST00000613602ENST00000615084ENST00000617389
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356889 N/A N/A N/A 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A 0.389±0.00 N/A
ENST00000395556 N/A N/A N/A N/A N/A N/A 0.761±0.00 N/A N/A N/A N/A N/A N/A
ENST00000419119 N/A 0.348±0.00 0.305±0.15 N/A N/A N/A N/A 0.363±0.00 0.550±0.00 N/A 2.619±0.99 N/A 0.835±0.00
ENST00000422854 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.551±0.00 N/A N/A N/A
ENST00000433017 N/A N/A 0.514±0.00 0.487±0.29 1.422±0.00 0.137±0.00 N/A N/A 0.512±0.00 N/A 2.206±0.00 0.405±0.16 1.179±0.00
ENST00000613602 0.540±0.00 N/A 0.974±0.00 0.593±0.00 1.434±0.00 0.303±0.00 1.556±0.00 0.313±0.02 0.970±0.00 1.100±0.00 2.813±1.05 0.425±0.09 2.882±0.00
ENST00000615084 N/A N/A 2.045±0.00 N/A 1.830±0.00 N/A N/A N/A N/A N/A N/A 0.355±0.02 N/A
ENST00000617389 N/A N/A N/A 0.760±0.00 N/A N/A N/A N/A N/A N/A 7.961±0.00 0.904±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XP CIL_0008XP_0001 VISTA 7:49879868-50480692
CIL_0008P3 CIL_0008P3_0001 VISTA 7:49993452-50594868
CIL_0008XT CIL_0008XT_0001 VISTA 7:50018042-50619048
CIL_0007SD CIL_0007SD_0001 VISTA 7:50081734-50682493
CIL_00089U CIL_00089U_0001 VISTA 7:50196544-50798008
CIL_000642 CIL_000642_0001 CGP 7:50304124-50542535
CIL_0008KL CIL_0008KL_0001 VISTA 7:50358274-50958701
CIL_000641 CIL_000641_0001 CGP 7:50444128-50565457

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000287 ISS magnesium ion binding
GO:0001649 ISS osteoblast differentiation
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination
GO:0009378 IEA four-way junction helicase activity
GO:0010569 IDA regulation of double-strand break repair via homologous recombination
GO:0016787 ISS hydrolase activity
GO:0033687 ISS osteoblast proliferation
GO:0043066 ISS negative regulation of apoptotic process
GO:0046034 ISS ATP metabolic process
GO:0051726 ISS regulation of cell cycle
GO:0070062 IDA extracellular vesicular exosome
GO:0071479 IDA cellular response to ionizing radiation
GO:2001243 IEA negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016427 fignl1 fidgetin-like 1 protein_coding Danio_rerio
ENSMUSG00000035455 Fignl1 fidgetin-like 1 protein_coding Mus_musculus

Loading