C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BTB (POZ) domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132640 BTBD3 9606 + 20:11890723-11926609 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254977 BTBD3-002 11890723-11926609 protein_coding
  ENST00000378226 BTBD3-201 11917865-11926590 protein_coding
  ENST00000399006 BTBD3-003 11890817-11926609 protein_coding
  ENST00000405977 BTBD3-001 11890828-11926609 protein_coding
  ENST00000422390 BTBD3-005 11892493-11922687 protein_coding
  ENST00000430557 BTBD3-008 11918851-11922729 protein_coding
  ENST00000449299 BTBD3-006 11890870-11923010 nonsense_mediated_decay
  ENST00000450368 BTBD3-004 11891327-11918463 protein_coding
  ENST00000455911 BTBD3-007 11918810-11922849 protein_coding
  ENST00000471120 BTBD3-009 11919277-11923035 processed_transcript
  ENST00000473180 BTBD3-012 11921566-11923130 processed_transcript
  ENST00000473416 BTBD3-011 11919541-11922889 processed_transcript
  ENST00000488503 BTBD3-010 11919277-11922985 processed_transcript
  ENST00000618296 BTBD3-202 11917865-11926590 protein_coding
  ENST00000618918 BTBD3-203 11892493-11926590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254977ENST00000378226ENST00000399006ENST00000405977ENST00000450368ENST00000618296ENST00000618918
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254977 1.700±0.00 N/A N/A 3.726±0.00 N/A 1.577±0.00 0.644±0.34 1.884±0.00 N/A 1.450±0.88 0.867±0.00 0.953±0.27 2.364±0.53 1.604±0.00
ENST00000378226 N/A N/A 1.325±0.00 13.145±2.73 N/A N/A 1.138±0.15 N/A 1.943±0.00 3.687±0.00 N/A N/A 2.654±0.60 N/A
ENST00000399006 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 N/A N/A N/A N/A
ENST00000405977 N/A 0.702±0.00 N/A N/A 0.516±0.00 N/A N/A 0.668±0.00 N/A N/A N/A 0.597±0.00 1.653±0.28 N/A
ENST00000450368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.506±0.00 N/A N/A N/A
ENST00000618296 N/A N/A N/A N/A 0.884±0.00 N/A N/A N/A 1.201±0.00 N/A N/A 1.071±0.58 N/A N/A
ENST00000618918 N/A N/A N/A N/A N/A 2.051±0.00 0.577±0.00 N/A N/A N/A 1.240±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000362 CIL_000362_0001 CGP 20:10637684-11926609
CIL_000361 CIL_000361_0001 CGP 20:11890723-13169103

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005829 ISS cytosol
GO:0021987 ISS cerebral cortex development
GO:0048813 ISS dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000087517 btbd3b BTB (POZ) domain containing 3b protein_coding Danio_rerio
ENSMUSG00000062098 Btbd3 BTB (POZ) domain containing 3 protein_coding Mus_musculus

Loading