C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000361_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132640-ENSG00000172296 CGP 9606 20:11890723-13169103
GeneTranscriptPositionBiotype
ENSG00000132640 (BTBD3)
BTB (POZ) domain containing 3 		ENST00000254977 (BTBD3-002) 11890723-11926609 protein_coding
ENST00000378226 (BTBD3-201) 11917865-11926590 protein_coding
ENST00000399006 (BTBD3-003) 11890817-11926609 protein_coding
ENST00000405977 (BTBD3-001) 11890828-11926609 protein_coding
ENST00000422390 (BTBD3-005) 11892493-11922687 protein_coding
ENST00000430557 (BTBD3-008) 11918851-11922729 protein_coding
ENST00000449299 (BTBD3-006) 11890870-11923010 nonsense_mediated_decay
ENST00000450368 (BTBD3-004) 11891327-11918463 protein_coding
ENST00000455911 (BTBD3-007) 11918810-11922849 protein_coding
ENST00000471120 (BTBD3-009) 11919277-11923035 processed_transcript
ENST00000473180 (BTBD3-012) 11921566-11923130 processed_transcript
ENST00000473416 (BTBD3-011) 11919541-11922889 processed_transcript
ENST00000488503 (BTBD3-010) 11919277-11922985 processed_transcript
ENST00000618296 (BTBD3-202) 11917865-11926590 protein_coding
ENST00000618918 (BTBD3-203) 11892493-11926590 protein_coding
ENSG00000172296 (SPTLC3)
serine palmitoyltransferase, long chain base subunit 3 		ENST00000399002 (SPTLC3-006) 13008994-13169103 protein_coding
ENST00000431275 (SPTLC3-003) 13126646-13164471 protein_coding
ENST00000434210 (SPTLC3-001) 13008987-13072371 protein_coding
ENST00000450297 (SPTLC3-002) 13009349-13079867 protein_coding
ENST00000476791 (SPTLC3-005) 13008979-13051018 processed_transcript
ENST00000485952 (SPTLC3-004) 13126655-13133042 processed_transcript
ENSG00000230437 (RP11-102J14.1)
 ENST00000442389 (RP11-102J14.1-001) 12305613-12316485 lincRNA
ENSG00000233048 (RP5-1069C8.2)
 ENST00000456265 (RP5-1069C8.2-001) 12865202-12952519 lincRNA
ENSG00000234265 (RP11-157E14.1)
 ENST00000432244 (RP11-157E14.1-001) 12950338-12951627 lincRNA
ENSG00000235292 (RP4-796I8.1)
 ENST00000455132 (RP4-796I8.1-001) 12243895-12244296 lincRNA
ENSG00000235698 (PA2G4P2)
proliferation-associated 2G4 pseudogene 2 		ENST00000414718 (PA2G4P2-001) 12380056-12381255 processed_pseudogene
ENSG00000236526 (RP4-742J24.2)
 ENST00000439529 (RP4-742J24.2-001) 11909404-11918677 antisense
ENSG00000269931 (RP5-1069C8.3)
 ENST00000602702 (RP5-1069C8.3-001) 12934877-12935783 lincRNA
ENSG00000271426 (RP4-718P11.1)
 ENST00000603234 (RP4-718P11.1-001) 13073667-13074312 processed_pseudogene
CIL_000361_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062098-ENSMUSG00000039092 CGP 10090 2:138256565-139637674
GeneTranscriptPositionBiotype
ENSMUSG00000039092 (Sptlc3)
serine palmitoyltransferase, long chain base subunit 3 		ENSMUST00000047370 (Sptlc3-002) 139493920-139637674 protein_coding
ENSMUST00000110083 (Sptlc3-001) 139493913-139637056 protein_coding
ENSMUSG00000062098 (Btbd3)
BTB (POZ) domain containing 3 		ENSMUST00000075410 (Btbd3-001) 138278493-138287422 protein_coding
ENSMUST00000091556 (Btbd3-002) 138256565-138287422 protein_coding
ENSMUST00000128656 (Btbd3-003) 138256670-138589292 processed_transcript
ENSMUST00000155646 (Btbd3-004) 138256662-138539208 processed_transcript
ENSMUSG00000082285 (Gm14069)
predicted gene 14069 		ENSMUST00000120815 (Gm14069-001) 139175897-139176125 unprocessed_pseudogene
ENSMUSG00000082331 (Gm14063)
predicted gene 14063 		ENSMUST00000119919 (Gm14063-001) 138622614-138622922 processed_pseudogene
ENSMUSG00000082466 (Gm14060)
predicted gene 14060 		ENSMUST00000117747 (Gm14060-001) 138453878-138454324 processed_pseudogene
ENSMUSG00000085071 (Gm14066)
predicted gene 14066 		ENSMUST00000134801 (Gm14066-001) 139256876-139677714 processed_transcript
ENSMUSG00000085911 (Gm14061)
predicted gene 14061 		ENSMUST00000155923 (Gm14061-001) 138589392-138649122 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000361_0001ENSG00000132640ENST00000254977ENST00000378226ENST00000399006ENST00000405977ENST00000450368ENST00000618296ENST00000618918ENSG00000172296ENST00000399002ENST00000431275ENST00000450297ENST00000476791ENSG00000230437ENST00000442389ENSG00000233048ENST00000456265ENSG00000234265ENST00000432244ENSG00000235292ENST00000455132ENSG00000235698ENST00000414718ENSG00000236526ENST00000439529ENSG00000269931ENST00000602702ENSG00000271426ENST00000603234CIL_000361_0002ENSMUSG00000039092ENSMUST00000047370ENSMUST00000110083ENSMUSG00000062098ENSMUST00000075410ENSMUST00000091556ENSMUSG00000082285ENSMUST00000120815ENSMUSG00000082331ENSMUST00000119919ENSMUSG00000082466ENSMUST00000117747ENSMUSG00000085071ENSMUST00000134801ENSMUSG00000085911ENSMUST00000155923
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132640 ENST00000254977 1.700±0.00 N/A N/A 3.726±0.00 N/A 1.577±0.00 0.644±0.34 1.884±0.00 N/A 1.450±0.88 0.867±0.00 0.953±0.27 2.364±0.53 1.604±0.00
ENST00000378226 N/A N/A 1.325±0.00 13.145±2.73 N/A N/A 1.138±0.15 N/A 1.943±0.00 3.687±0.00 N/A N/A 2.654±0.60 N/A
ENST00000399006 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.310±0.00 N/A N/A N/A N/A
ENST00000405977 N/A 0.702±0.00 N/A N/A 0.516±0.00 N/A N/A 0.668±0.00 N/A N/A N/A 0.597±0.00 1.653±0.28 N/A
ENST00000422390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.506±0.00 N/A N/A N/A
ENST00000455911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618296 N/A N/A N/A N/A 0.884±0.00 N/A N/A N/A 1.201±0.00 N/A N/A 1.071±0.58 N/A N/A
ENST00000618918 N/A N/A N/A N/A N/A 2.051±0.00 0.577±0.00 N/A N/A N/A 1.240±0.00 N/A N/A N/A
ENSG00000172296 ENST00000399002 0.574±0.00 0.234±0.00 1.909±0.00 0.112±0.07 0.928±0.21 N/A 0.389±0.24 1.885±0.00 1.289±0.47 1.105±0.09 0.046±0.01 0.666±0.27 5.283±1.81 1.186±0.00
ENST00000431275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.778±0.00 6.227±0.00
ENST00000434210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450297 N/A N/A N/A N/A 2.086±0.00 N/A N/A N/A N/A N/A N/A N/A 10.235±0.00 N/A
ENST00000476791 N/A N/A 1.231±0.00 N/A N/A 0.496±0.00 0.131±0.00 N/A N/A 0.632±0.00 0.143±0.00 N/A N/A 0.494±0.06
ENST00000485952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230437 ENST00000442389 N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A
ENSG00000233048 ENST00000456265 0.144±0.00 0.499±0.00 N/A 0.386±0.00 0.133±0.00 0.133±0.00 0.072±0.04 0.221±0.00 0.093±0.00 0.102±0.03 0.029±0.00 0.014±0.01 0.049±0.00 0.244±0.00
ENSG00000234265 ENST00000432244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.833±3.45
ENSG00000235292 ENST00000455132 N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A
ENSG00000235698 ENST00000414718 N/A 0.011±0.00 N/A 0.024±0.00 N/A 0.058±0.05 0.032±0.00 N/A N/A 0.085±0.07 0.020±0.00 0.022±0.01 0.016±0.00 0.051±0.00
ENSG00000236526 ENST00000439529 N/A N/A 1.382±0.00 N/A N/A N/A 0.777±0.00 N/A N/A 1.670±0.00 0.569±0.00 1.354±0.00 N/A N/A
ENSG00000269931 ENST00000602702 N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A 0.123±0.00 N/A N/A N/A N/A 2.931±1.18
ENSG00000271426 ENST00000603234 N/A N/A 0.226±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A 0.072±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039092 ENSMUST00000047370 N/A N/A 1.636±0.00 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A
ENSMUST00000110083 0.578±0.04 N/A 12.122±1.71 0.105±0.07 0.584±0.25 N/A 0.043±0.01 0.773±0.13 0.016±0.01 0.784±0.37 0.024±0.01 0.568±0.40 0.113±0.07 0.254±0.15
ENSMUSG00000062098 ENSMUST00000075410 2.737±0.74 1.112±0.35 3.828±0.07 4.121±1.29 1.158±0.30 1.407±0.56 0.946±0.34 0.803±0.25 0.323±0.06 4.430±1.06 0.899±0.22 3.702±2.43 2.376±1.81 0.133±0.04
ENSMUST00000091556 7.057±1.02 3.329±1.42 7.006±1.12 11.844±2.05 4.220±0.39 6.063±0.75 2.535±0.59 3.755±0.66 1.341±0.42 13.059±1.81 1.590±0.55 7.655±3.55 4.208±0.89 0.845±0.06
ENSMUST00000128656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082285 ENSMUST00000120815 N/A N/A 0.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082331 ENSMUST00000119919 0.435±0.21 N/A 0.058±0.00 0.695±0.42 0.828±0.41 0.597±0.16 0.195±0.01 0.291±0.10 0.306±0.22 0.399±0.17 0.265±0.00 1.263±0.41 N/A 0.324±0.10
ENSMUSG00000082466 ENSMUST00000117747 0.633±0.54 0.488±0.02 0.039±0.01 0.389±0.28 0.529±0.37 0.714±0.34 0.210±0.00 0.233±0.12 0.052±0.01 0.895±0.14 N/A 1.082±0.45 0.136±0.04 0.288±0.16
ENSMUSG00000085071 ENSMUST00000134801 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A 0.013±0.00 0.021±0.01 N/A
ENSMUSG00000085911 ENSMUST00000155923 N/A N/A 0.008±0.00 0.098±0.07 N/A N/A N/A 0.068±0.02 0.006±0.00 N/A N/A 0.077±0.00 0.024±0.02 0.020±0.00

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