C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane and coiled-coil domain family 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000133069 TMCC2 9606 + 1:205228176-205273343 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000329800 TMCC2-003 205256201-205273343 protein_coding
  ENST00000330675 TMCC2-004 205246620-205273343 protein_coding
  ENST00000358024 TMCC2-001 205228176-205273343 protein_coding
  ENST00000367159 TMCC2-005 205246496-205269558 protein_coding
  ENST00000468846 TMCC2-007 205256201-205272252 processed_transcript
  ENST00000481950 TMCC2-006 205257231-205273343 processed_transcript
  ENST00000495538 TMCC2-002 205229732-205273343 processed_transcript
  ENST00000545499 TMCC2-201 205228931-205273342 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000329800ENST00000330675ENST00000358024ENST00000367159ENST00000468846ENST00000481950ENST00000495538ENST00000545499
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000329800 0.480±0.00 N/A N/A N/A 0.243±0.00 N/A N/A N/A N/A 3.408±0.00 N/A N/A 1.797±1.05 N/A
ENST00000330675 N/A N/A N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A 0.102±0.00 1.127±1.52 0.877±0.07 1.326±0.00
ENST00000358024 0.465±0.00 0.473±0.00 N/A 12.080±6.28 0.588±0.11 2.425±0.00 0.387±0.32 0.512±0.00 0.521±0.00 2.647±0.00 1.183±1.05 2.353±2.45 0.811±0.16 3.257±0.38
ENST00000367159 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.229±0.00 N/A N/A N/A N/A
ENST00000468846 N/A N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A
ENST00000481950 N/A N/A N/A 12.542±0.00 N/A 2.223±0.00 N/A N/A 0.021±0.00 N/A 0.971±0.00 N/A N/A 1.812±0.00
ENST00000495538 N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A N/A 0.924±0.00 N/A 0.073±0.00 0.349±0.11 N/A
ENST00000545499 N/A N/A 0.115±0.00 N/A N/A 0.031±0.00 0.017±0.00 N/A N/A 0.248±0.00 N/A N/A 0.248±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046007 tmcc2 transmembrane and coiled-coil domain family 2 protein_coding Danio_rerio
ENSMUSG00000042066 Tmcc2 transmembrane and coiled-coil domains 2 protein_coding Mus_musculus

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