C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and coiled-coil domain family 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358024 TMCC2-001 ENSG00000133069 9606 + 1:205228176-205273343 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358024
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358024 0.465±0.00 0.473±0.00 12.080±6.28 0.588±0.11 2.425±0.00 0.387±0.32 0.512±0.00 0.521±0.00 2.647±0.00 1.183±1.05 2.353±2.45 0.811±0.16 3.257±0.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045473 Tmcc2-001 protein_coding Mus_musculus 0 2686
ENSMUST00000132435 Tmcc2-002 protein_coding Mus_musculus 0 2326
ENSMUST00000142609 Tmcc2-003 protein_coding Mus_musculus 0 1755
ENSMUST00000138717 Tmcc2-004 retained_intron Mus_musculus 0 1110
ENSDART00000086434 tmcc2-001 protein_coding Danio_rerio 0 560
ENSDART00000067639 TMCC1 (2 of 2)-201 protein_coding Danio_rerio 0 279
ENSMUST00000173110 Tmcc1-004 nonsense_mediated_decay Mus_musculus 0 233
ENSMUST00000172510 Tmcc1-008 protein_coding Mus_musculus 0 233
ENSMUST00000032222 Tmcc1-003 protein_coding Mus_musculus 0 233
ENSMUST00000088896 Tmcc1-001 protein_coding Mus_musculus 0 233

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