C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane and coiled-coil domains 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042066 Tmcc2 10090 - 1:132356315-132391281 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045473 Tmcc2-001 132356315-132391281 protein_coding
  ENSMUST00000125439 Tmcc2-006 132361026-132364948 processed_transcript
  ENSMUST00000132435 Tmcc2-002 132356323-132390318 protein_coding
  ENSMUST00000136828 Tmcc2-005 132360599-132367072 processed_transcript
  ENSMUST00000138717 Tmcc2-004 132356316-132367886 retained_intron
  ENSMUST00000142609 Tmcc2-003 132356316-132367887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045473ENSMUST00000132435ENSMUST00000136828ENSMUST00000138717ENSMUST00000142609
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045473 4.401±0.99 3.415±1.37 3.291±0.99 32.493±19.65 7.347±1.33 3.217±0.93 6.346±1.50 2.187±0.54 0.764±0.02 17.087±1.65 18.331±4.31 5.068±2.54 1.351±0.68 0.714±0.24
ENSMUST00000132435 0.760±0.00 3.491±1.23 N/A N/A 1.792±1.05 1.622±0.72 N/A 0.911±0.60 0.358±0.09 16.550±3.67 N/A 3.398±1.44 N/A N/A
ENSMUST00000136828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.473±0.00 N/A
ENSMUST00000138717 N/A N/A N/A N/A N/A N/A N/A N/A 26.824±24.91 5.854±0.00 N/A 0.585±0.05 0.712±0.39 0.019±0.00
ENSMUST00000142609 N/A N/A N/A N/A N/A N/A N/A N/A 95.733±119.53 31.933±5.87 N/A 1.615±0.00 1.826±0.86 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000046007 tmcc2 transmembrane and coiled-coil domain family 2 protein_coding Danio_rerio
ENSG00000133069 TMCC2 transmembrane and coiled-coil domain family 2 protein_coding Homo_sapiens

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