C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C1q and tumor necrosis factor related protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000133466 C1QTNF6 9606 - 22:37180167-37199385 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337843 C1QTNF6-004 37180167-37188289 protein_coding
  ENST00000397110 C1QTNF6-001 37180167-37188286 protein_coding
  ENST00000434784 C1QTNF6-003 37182174-37188236 protein_coding
  ENST00000467564 C1QTNF6-007 37190553-37197748 processed_transcript
  ENST00000470655 C1QTNF6-002 37180167-37198301 processed_transcript
  ENST00000493023 C1QTNF6-005 37180171-37185948 retained_intron
  ENST00000497071 C1QTNF6-006 37190553-37199385 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337843ENST00000397110ENST00000434784ENST00000470655ENST00000493023ENST00000497071
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337843 0.817±0.00 4.389±0.00 N/A 0.648±0.00 2.170±0.00 0.697±0.00 0.140±0.00 2.247±0.00 0.313±0.00 0.682±0.00 0.329±0.00 6.237±2.58 41.573±13.46 1.898±0.00
ENST00000397110 N/A N/A N/A N/A N/A N/A N/A N/A 0.454±0.00 N/A N/A 0.821±0.00 19.483±0.00 N/A
ENST00000434784 N/A N/A N/A N/A N/A N/A N/A N/A 0.751±0.00 0.631±0.00 0.647±0.00 N/A N/A N/A
ENST00000470655 N/A 0.565±0.00 N/A 0.117±0.00 0.100±0.00 0.324±0.00 0.031±0.00 0.238±0.00 N/A 0.068±0.00 0.050±0.00 N/A N/A N/A
ENST00000493023 N/A N/A 0.127±0.00 0.377±0.00 N/A 0.264±0.06 0.124±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000497071 N/A N/A 0.496±0.00 N/A N/A N/A N/A N/A N/A N/A 0.863±0.00 N/A N/A 1.282±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036M CIL_00036M_0001 CGP 22:37125838-37199385
CIL_00036N CIL_00036N_0001 CGP 22:37180167-37212322

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005581 IEA collagen trimer
GO:0005615 IEA extracellular space
GO:0042802 IEA identical protein binding
GO:0051259 IEA protein oligomerization
GO:0070208 IEA protein heterotrimerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000022440 C1qtnf6 C1q and tumor necrosis factor related protein 6 protein_coding Mus_musculus

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