C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C1q and tumor necrosis factor related protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337843 C1QTNF6-004 ENSG00000133466 9606 - 22:37180167-37188289 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337843
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337843 0.817±0.00 4.389±0.00 0.648±0.00 2.170±0.00 0.697±0.00 0.140±0.00 2.247±0.00 0.313±0.00 0.682±0.00 0.329±0.00 6.237±2.58 41.573±13.46 1.898±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036M CIL_00036M_0001 CGP 22:37125838-37199385
CIL_00036N CIL_00036N_0001 CGP 22:37180167-37212322

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005581 IEA collagen trimer
GO:0005615 IEA extracellular space
GO:0042802 IEA identical protein binding
GO:0051259 IEA protein oligomerization
GO:0070208 IEA protein heterotrimerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023075 C1qtnf6-001 protein_coding Mus_musculus 0 449
ENSMUST00000147093 C1qtnf6-002 processed_transcript Mus_musculus 0 316

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