C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C1q and tumor necrosis factor related protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022440 C1qtnf6 10090 - 15:78523346-78529625 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000023075 C1qtnf6-001 78523346-78529625 protein_coding
  ENSMUST00000137827 C1qtnf6-003 78525123-78527327 processed_transcript
  ENSMUST00000147093 C1qtnf6-002 78523346-78529625 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023075ENSMUST00000147093
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023075 18.190±4.33 26.121±4.60 13.316±2.45 4.415±0.73 19.802±3.97 26.165±3.19 6.725±1.38 4.234±0.23 2.455±1.88 7.287±1.18 1.435±0.18 65.601±26.35 35.292±21.91 3.664±0.46
ENSMUST00000147093 4.008±0.53 6.684±1.64 1.963±0.18 0.382±0.25 10.301±6.94 3.183±0.36 1.427±0.29 0.836±0.21 0.552±0.15 2.047±0.64 0.673±0.25 6.384±2.54 6.851±3.15 0.289±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036M CIL_00036M_0002 CGP 15:78480553-78529625
CIL_00036N CIL_00036N_0002 CGP 15:78523346-78544345

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005581 IEA collagen trimer
GO:0005615 IDA extracellular space
GO:0042802 IDA identical protein binding
GO:0051259 IDA protein oligomerization
GO:0070208 IPI protein heterotrimerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000133466 C1QTNF6 C1q and tumor necrosis factor related protein 6 protein_coding Homo_sapiens

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