C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: E2F transcription factor 5, p130-binding
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000133740 E2F5 9606 + 8:85177225-85217158 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000256117 E2F5-007 85177612-85217158 nonsense_mediated_decay
  ENST00000416274 E2F5-001 85177387-85214515 protein_coding
  ENST00000418930 E2F5-002 85177225-85214518 protein_coding
  ENST00000517476 E2F5-004 85187685-85214037 protein_coding
  ENST00000518234 E2F5-006 85206163-85216209 protein_coding
  ENST00000520225 E2F5-005 85209213-85214518 protein_coding
  ENST00000521234 E2F5-008 85201785-85203262 retained_intron
  ENST00000521429 E2F5-003 85187685-85214490 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLungOvaryPlacentaTestisENST00000256117ENST00000416274ENST00000418930ENST00000517476
Transcript ID Bladder Brain Breast Colon Kidney Lung Ovary Placenta Testis
ENST00000256117 0.356±0.00 0.473±0.00 0.593±0.00 0.288±0.00 0.522±0.33 0.580±0.16 0.281±0.00 N/A N/A
ENST00000416274 N/A N/A N/A N/A N/A N/A N/A 2.496±0.00 N/A
ENST00000418930 0.983±0.00 N/A N/A N/A N/A N/A 2.072±0.00 N/A 4.428±1.35
ENST00000517476 N/A N/A N/A N/A N/A N/A 3.985±0.00 3.727±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071V CIL_00071V_0001 CGP 8:85107147-85217158
CIL_0006T3 CIL_0006T3_0001 CGP 8:85177225-85220421

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IEA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006351 IEA:TAS transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0008134 IPI transcription factor binding
GO:0009887 IEA organ morphogenesis
GO:0010467 TAS gene expression
GO:0045944 TAS positive regulation of transcription from RNA polymerase II promoter
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038812 e2f5 E2F transcription factor 5 protein_coding Danio_rerio
ENSMUSG00000027552 E2f5 E2F transcription factor 5 protein_coding Mus_musculus

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