C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E2F transcription factor 5, p130-binding
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416274 E2F5-001 ENSG00000133740 9606 + 8:85177387-85214515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000416274
Transcript ID Placenta
ENST00000416274 2.496±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071V CIL_00071V_0001 CGP 8:85107147-85217158
CIL_0006T3 CIL_0006T3_0001 CGP 8:85177225-85220421

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IEA transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006351 IEA:TAS transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0008134 IPI transcription factor binding
GO:0009887 IEA organ morphogenesis
GO:0010467 TAS gene expression
GO:0045944 TAS positive regulation of transcription from RNA polymerase II promoter
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029069 E2f5-201 protein_coding Mus_musculus 0 1430
ENSMUST00000165922 E2f5-202 protein_coding Mus_musculus 0 1417

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