C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133739-ENSG00000133740 CGP 9606 8:85107147-85217158
GeneTranscriptPositionBiotype
ENSG00000133739 (LRRCC1)
leucine rich repeat and coiled-coil centrosomal protein 1 		ENST00000360375 (LRRCC1-001) 85107147-85146076 protein_coding
ENST00000414626 (LRRCC1-006) 85108662-85146076 protein_coding
ENST00000517875 (LRRCC1-002) 85107238-85138074 nonsense_mediated_decay
ENST00000522567 (LRRCC1-005) 85107215-85138174 nonsense_mediated_decay
ENST00000522770 (LRRCC1-003) 85107238-85138170 nonsense_mediated_decay
ENST00000523669 (LRRCC1-004) 85107238-85131930 nonsense_mediated_decay
ENSG00000133740 (E2F5)
E2F transcription factor 5, p130-binding 		ENST00000256117 (E2F5-007) 85177612-85217158 nonsense_mediated_decay
ENST00000416274 (E2F5-001) 85177387-85214515 protein_coding
ENST00000418930 (E2F5-002) 85177225-85214518 protein_coding
ENST00000517476 (E2F5-004) 85187685-85214037 protein_coding
ENST00000518234 (E2F5-006) 85206163-85216209 protein_coding
ENST00000520225 (E2F5-005) 85209213-85214518 protein_coding
ENST00000521234 (E2F5-008) 85201785-85203262 retained_intron
ENST00000521429 (E2F5-003) 85187685-85214490 protein_coding
ENSG00000260493 (RP11-219B4.7)
 ENST00000562577 (RP11-219B4.7-001) 85172077-85177041 antisense
ENST00000566000 (RP11-219B4.7-002) 85175799-85177062 antisense
CIL_00071V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027550-ENSMUSG00000027552 CGP 10090 3:14533788-14606308
GeneTranscriptPositionBiotype
ENSMUSG00000027550 (Lrrcc1)
leucine rich repeat and coiled-coil domain containing 1 		ENSMUST00000091325 (Lrrcc1-002) 14533824-14566103 protein_coding
ENSMUST00000108370 (Lrrcc1-004) 14533788-14572658 protein_coding
ENSMUST00000163660 (Lrrcc1-006) 14533879-14562163 protein_coding
ENSMUST00000165436 (Lrrcc1-005) 14533934-14551473 nonsense_mediated_decay
ENSMUST00000167858 (Lrrcc1-003) 14548117-14566406 protein_coding
ENSMUST00000169079 (Lrrcc1-001) 14533823-14568301 protein_coding
ENSMUST00000169799 (Lrrcc1-007) 14550380-14559325 protein_coding
ENSMUST00000171620 (Lrrcc1-008) 14548193-14554472 nonsense_mediated_decay
ENSMUSG00000027552 (E2f5)
E2F transcription factor 5 		ENSMUST00000029069 (E2f5-201) 14578671-14606308 protein_coding
ENSMUST00000165922 (E2f5-202) 14578671-14606308 protein_coding
ENSMUSG00000078784 (1810022K09Rik)
RIKEN cDNA 1810022K09 gene 		ENSMUST00000108365 (1810022K09Rik-001) 14606289-14611221 protein_coding
ENSMUST00000185384 (1810022K09Rik-002) 14606284-14611285 protein_coding
ENSMUST00000185423 (1810022K09Rik-004) 14606293-14611254 protein_coding
ENSMUST00000186870 (1810022K09Rik-003) 14606289-14611261 protein_coding
ENSMUST00000190064 (1810022K09Rik-005) 14609184-14611243 retained_intron
ENSMUSG00000090300 (Gm17119)
predicted gene 17119 		ENSMUST00000163943 (Gm17119-001) 14564402-14564681 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071V_0001ENSG00000133739ENST00000360375ENST00000414626ENST00000517875ENST00000522567ENST00000522770ENST00000523669ENSG00000133740ENST00000256117ENST00000416274ENST00000418930ENST00000517476ENST00000518234ENST00000520225ENST00000521234ENST00000521429ENSG00000260493ENST00000562577ENST00000566000CIL_00071V_0002ENSMUSG00000027550ENSMUST00000091325ENSMUST00000108370ENSMUST00000163660ENSMUST00000165436ENSMUST00000167858ENSMUST00000169079ENSMUST00000169799ENSMUST00000171620ENSMUSG00000027552ENSMUST00000029069ENSMUST00000165922ENSMUSG00000078784ENSMUST00000108365ENSMUST00000185384ENSMUST00000185423ENSMUST00000186870ENSMUST00000190064ENSMUSG00000090300ENSMUST00000163943
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071V_0001ENSG00000133739ENST00000360375ENST00000414626ENST00000517875ENST00000522567ENST00000522770ENSG00000133740ENST00000256117ENST00000416274ENST00000418930ENST00000517476ENSG00000260493ENST00000562577ENST00000566000CIL_00071V_0002ENSMUSG00000027550ENSMUST00000091325ENSMUST00000108370ENSMUST00000165436ENSMUST00000167858ENSMUST00000169079ENSMUSG00000027552ENSMUST00000029069ENSMUST00000165922ENSMUSG00000078784ENSMUST00000108365ENSMUST00000185384ENSMUST00000185423ENSMUST00000186870ENSMUSG00000090300ENSMUST00000163943
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133739 ENST00000360375 0.201±0.00 0.346±0.00 N/A 0.254±0.06 0.272±0.05 N/A 0.182±0.00 N/A 0.249±0.00 N/A N/A 1.263±0.92 0.368±0.00 7.494±4.60
ENST00000414626 N/A N/A N/A 0.169±0.00 0.756±0.00 N/A 0.041±0.00 N/A 0.155±0.00 N/A N/A 0.099±0.00 N/A N/A
ENST00000517875 N/A N/A 0.601±0.00 0.928±0.00 N/A N/A 0.276±0.12 N/A 0.787±0.00 N/A 0.074±0.00 N/A N/A N/A
ENST00000522567 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.897±0.00 0.113±0.00 0.777±0.00 N/A N/A
ENST00000522770 N/A N/A N/A 0.364±0.00 N/A 1.788±0.00 0.175±0.00 N/A N/A N/A 0.083±0.00 N/A N/A N/A
ENST00000523669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000133740 ENST00000256117 N/A N/A 0.356±0.00 0.473±0.00 0.593±0.00 0.288±0.00 N/A 0.522±0.33 N/A 0.580±0.16 N/A 0.281±0.00 N/A N/A
ENST00000416274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.496±0.00 N/A
ENST00000418930 N/A N/A 0.983±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.072±0.00 N/A 4.428±1.35
ENST00000517476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.985±0.00 3.727±0.00 N/A
ENST00000518234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260493 ENST00000562577 N/A 0.207±0.00 N/A 0.163±0.11 N/A 0.397±0.00 N/A 0.210±0.00 N/A N/A N/A 0.072±0.00 N/A 0.219±0.02
ENST00000566000 0.019±0.00 0.256±0.00 N/A 0.060±0.00 0.045±0.00 0.085±0.00 0.009±0.00 0.028±0.00 N/A 0.008±0.00 0.008±0.00 0.052±0.00 N/A 0.187±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027550 ENSMUST00000091325 0.477±0.00 N/A N/A 2.719±0.00 N/A 0.500±0.02 N/A 0.235±0.00 0.568±0.38 0.559±0.00 N/A 1.088±0.80 2.066±0.95 26.455±0.00
ENSMUST00000108370 0.252±0.00 0.289±0.09 0.682±0.00 N/A N/A N/A N/A 0.265±0.00 0.469±0.00 0.827±0.00 0.332±0.09 0.935±0.71 1.050±0.27 26.576±2.38
ENSMUST00000163660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165436 N/A N/A N/A N/A N/A 0.691±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167858 N/A 0.225±0.06 N/A 4.267±0.00 N/A 0.215±0.00 N/A N/A 0.069±0.00 N/A N/A 2.345±0.37 1.771±0.32 N/A
ENSMUST00000169079 0.427±0.05 0.259±0.11 1.037±0.06 2.272±0.29 0.656±0.21 0.513±0.14 0.384±0.15 0.720±0.16 0.381±0.24 0.959±0.51 0.268±0.09 1.189±0.69 0.651±0.28 N/A
ENSMUST00000169799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027552 ENSMUST00000029069 5.690±2.00 13.317±5.59 7.149±2.18 9.600±5.77 8.268±3.40 15.166±3.66 1.847±0.43 11.354±1.44 4.956±2.14 5.905±0.32 1.106±0.07 15.523±9.47 6.647±2.08 8.699±2.26
ENSMUST00000165922 N/A N/A N/A N/A 2.157±0.00 N/A N/A N/A N/A N/A N/A 11.550±6.58 N/A N/A
ENSMUSG00000078784 ENSMUST00000108365 N/A N/A N/A N/A N/A N/A N/A N/A 2.747±0.00 N/A N/A N/A N/A N/A
ENSMUST00000185384 N/A N/A 55.073±9.76 37.570±3.54 N/A N/A 4.572±0.52 N/A 73.952±28.17 N/A 26.393±1.34 91.453±2.14 62.080±44.58 N/A
ENSMUST00000185423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.914±5.90 N/A
ENSMUST00000186870 2.780±0.61 N/A 13.097±4.17 13.275±9.33 2.943±0.47 N/A 1.077±0.35 3.124±0.00 6.499±1.94 4.139±0.40 2.137±0.43 8.002±3.26 4.113±1.35 N/A
ENSMUST00000190064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000090300 ENSMUST00000163943 N/A N/A N/A N/A N/A N/A N/A N/A 0.738±0.00 N/A N/A N/A N/A N/A

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