C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134287 ARF3 9606 - 12:48935723-48957551 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000256682 ARF3-001 48935723-48957551 protein_coding
  ENST00000447318 ARF3-005 48938554-48957477 protein_coding
  ENST00000472621 ARF3-002 48941124-48956492 processed_transcript
  ENST00000485410 ARF3-003 48938421-48957445 processed_transcript
  ENST00000536283 ARF3-006 48956152-48957462 processed_transcript
  ENST00000539611 ARF3-007 48940104-48957378 protein_coding
  ENST00000541236 ARF3-010 48939732-48957069 protein_coding
  ENST00000541959 ARF3-012 48938925-48957445 protein_coding
  ENST00000541967 ARF3-008 48941094-48957205 processed_transcript
  ENST00000545855 ARF3-011 48940975-48956440 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256682ENST00000541236ENST00000541959
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256682 48.703±0.00 47.877±0.00 5.461±0.00 20.100±0.00 23.546±13.35 23.215±17.40 6.905±5.60 28.927±25.86 13.844±0.00 31.621±27.60 4.060±0.00 39.930±20.06 42.364±6.60 43.318±11.21
ENST00000541236 N/A N/A N/A 40.378±0.00 N/A N/A 3.249±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000541959 58.071±0.00 87.839±0.00 N/A 184.398±0.00 49.525±0.00 44.685±0.00 N/A 6.971±0.00 5.841±0.00 N/A 5.885±0.00 60.124±0.00 40.507±0.00 60.202±4.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000G CIL_00000G_0001 CGP 12:48935723-48971763

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0003924 TAS:IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006184 TAS GTP catabolic process
GO:0006644 TAS phospholipid metabolic process
GO:0006661 TAS phosphatidylinositol biosynthetic process
GO:0006886 IEA intracellular protein transport
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0019001 IEA guanyl nucleotide binding
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0044281 TAS small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036998 arf3b ADP-ribosylation factor 3b protein_coding Danio_rerio
ENSMUSG00000051853 Arf3 ADP-ribosylation factor 3 protein_coding Mus_musculus

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