C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00000G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134287-ENSG00000169884 CGP 9606 12:48935723-48971763
GeneTranscriptPositionBiotype
ENSG00000134287 (ARF3)
ADP-ribosylation factor 3 		ENST00000256682 (ARF3-001) 48935723-48957551 protein_coding
ENST00000447318 (ARF3-005) 48938554-48957477 protein_coding
ENST00000472621 (ARF3-002) 48941124-48956492 processed_transcript
ENST00000485410 (ARF3-003) 48938421-48957445 processed_transcript
ENST00000536283 (ARF3-006) 48956152-48957462 processed_transcript
ENST00000539611 (ARF3-007) 48940104-48957378 protein_coding
ENST00000541236 (ARF3-010) 48939732-48957069 protein_coding
ENST00000541959 (ARF3-012) 48938925-48957445 protein_coding
ENST00000541967 (ARF3-008) 48941094-48957205 processed_transcript
ENST00000545855 (ARF3-011) 48940975-48956440 protein_coding
ENSG00000169884 (WNT10B)
wingless-type MMTV integration site family, member 10B 		ENST00000301061 (WNT10B-001) 48965340-48971763 protein_coding
ENST00000403957 (WNT10B-002) 48965556-48971718 protein_coding
ENST00000407467 (WNT10B-003) 48965405-48971498 protein_coding
ENST00000413630 (WNT10B-006) 48968296-48970756 protein_coding
ENST00000420388 (WNT10B-004) 48970120-48970889 protein_coding
ENST00000475740 (WNT10B-005) 48970120-48970652 retained_intron
CIL_00000G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051853-ENSMUSG00000022996 CGP 10090 15:98737621-98778150
GeneTranscriptPositionBiotype
ENSMUSG00000022996 (Wnt10b)
wingless-type MMTV integration site family, member 10B 		ENSMUST00000023732 (Wnt10b-201) 98771753-98778150 protein_coding
ENSMUST00000166022 (Wnt10b-202) 98772200-98777261 protein_coding
ENSMUSG00000051853 (Arf3)
ADP-ribosylation factor 3 		ENSMUST00000053183 (Arf3-001) 98737621-98763211 protein_coding
ENSMUST00000129354 (Arf3-002) 98741057-98763214 processed_transcript
ENSMUST00000156572 (Arf3-003) 98742593-98762992 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000G_0001ENSG00000134287ENST00000256682ENST00000447318ENST00000472621ENST00000485410ENST00000536283ENST00000539611ENST00000541236ENST00000541959ENST00000541967ENST00000545855ENSG00000169884ENST00000301061ENST00000403957ENST00000407467ENST00000413630ENST00000420388ENST00000475740CIL_00000G_0002ENSMUSG00000022996ENSMUST00000023732ENSMUST00000166022ENSMUSG00000051853ENSMUST00000053183ENSMUST00000129354ENSMUST00000156572
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00000G_0001ENSG00000134287ENST00000256682ENST00000541236ENST00000541959ENSG00000169884ENST00000301061ENST00000403957ENST00000407467CIL_00000G_0002ENSMUSG00000022996ENSMUST00000023732ENSMUST00000166022ENSMUSG00000051853ENSMUST00000053183
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134287 ENST00000256682 48.703±0.00 47.877±0.00 5.461±0.00 20.100±0.00 23.546±13.35 23.215±17.40 6.905±5.60 28.927±25.86 13.844±0.00 31.621±27.60 4.060±0.00 39.930±20.06 42.364±6.60 43.318±11.21
ENST00000447318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541236 N/A N/A N/A 40.378±0.00 N/A N/A 3.249±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000541959 58.071±0.00 87.839±0.00 N/A 184.398±0.00 49.525±0.00 44.685±0.00 N/A 6.971±0.00 5.841±0.00 N/A 5.885±0.00 60.124±0.00 40.507±0.00 60.202±4.33
ENST00000541967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169884 ENST00000301061 N/A 0.332±0.00 N/A 0.838±0.00 0.500±0.00 0.022±0.00 0.073±0.00 N/A 0.192±0.00 N/A N/A 0.195±0.14 0.932±0.76 0.520±0.07
ENST00000403957 0.041±0.00 0.354±0.00 N/A 0.555±0.00 N/A 0.035±0.00 N/A N/A 0.222±0.21 0.245±0.00 0.038±0.00 0.188±0.06 0.653±0.00 N/A
ENST00000407467 N/A N/A N/A 0.533±0.00 N/A 0.100±0.00 N/A 0.098±0.00 N/A 0.517±0.00 N/A N/A 0.240±0.00 2.107±0.00
ENST00000413630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022996 ENSMUST00000023732 0.538±0.10 0.362±0.20 0.472±0.00 0.261±0.00 1.829±0.81 0.138±0.04 0.042±0.00 0.081±0.03 0.029±0.01 2.471±0.00 0.199±0.09 14.831±6.11 0.331±0.30 0.058±0.03
ENSMUST00000166022 0.182±0.00 0.181±0.04 N/A 0.206±0.00 0.683±0.10 0.162±0.08 0.084±0.05 0.098±0.04 0.018±0.01 4.282±1.80 0.122±0.06 31.610±12.95 0.043±0.02 0.156±0.05
ENSMUSG00000051853 ENSMUST00000053183 34.834±10.08 62.735±7.63 46.231±1.39 88.877±39.28 36.230±14.16 44.546±21.30 7.762±2.39 41.128±10.12 16.227±4.26 78.797±17.50 3.757±0.87 75.315±26.35 22.517±9.08 32.356±17.12
ENSMUST00000129354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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