C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 106C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134291 TMEM106C 9606 + 12:47963569-47968878 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000256686 TMEM106C-002 47963584-47968849 protein_coding
  ENST00000429772 TMEM106C-001 47963620-47968878 protein_coding
  ENST00000449758 TMEM106C-003 47963635-47968849 protein_coding
  ENST00000546749 TMEM106C-010 47963607-47966726 protein_coding
  ENST00000547136 TMEM106C-017 47965653-47966450 retained_intron
  ENST00000547682 TMEM106C-019 47965928-47968488 protein_coding
  ENST00000548153 TMEM106C-006 47963596-47965522 retained_intron
  ENST00000548355 TMEM106C-020 47964213-47968336 nonsense_mediated_decay
  ENST00000548640 TMEM106C-015 47963858-47968187 protein_coding
  ENST00000548965 TMEM106C-021 47964241-47968211 protein_coding
  ENST00000549287 TMEM106C-018 47966556-47968488 retained_intron
  ENST00000549288 TMEM106C-008 47963596-47968200 protein_coding
  ENST00000550146 TMEM106C-007 47963569-47968263 nonsense_mediated_decay
  ENST00000550161 TMEM106C-013 47963635-47967065 protein_coding
  ENST00000550552 TMEM106C-012 47963609-47968256 protein_coding
  ENST00000551305 TMEM106C-005 47963584-47968171 retained_intron
  ENST00000551705 TMEM106C-014 47963638-47965665 retained_intron
  ENST00000552187 TMEM106C-009 47963601-47964765 retained_intron
  ENST00000552546 TMEM106C-011 47963607-47968376 protein_coding
  ENST00000552561 TMEM106C-004 47963605-47968229 protein_coding
  ENST00000553217 TMEM106C-016 47964209-47968434 nonsense_mediated_decay
  ENST00000615597 TMEM106C-022 47965964-47967192 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256686ENST00000429772ENST00000449758ENST00000546749ENST00000547682ENST00000548355ENST00000548640ENST00000549287ENST00000549288ENST00000550146ENST00000550552ENST00000551305ENST00000552546ENST00000552561ENST00000553217
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256686 1.093±0.00 5.678±0.00 N/A 1.531±0.00 N/A N/A N/A N/A 2.108±1.59 3.954±2.92 1.040±0.00 15.540±2.76 14.471±4.68 7.781±1.02
ENST00000429772 N/A N/A N/A N/A N/A 4.841±0.00 N/A 6.973±0.00 N/A N/A N/A 13.287±0.00 5.335±1.34 9.335±0.84
ENST00000449758 2.751±0.00 N/A N/A 2.444±0.00 N/A N/A 5.364±0.00 4.730±0.00 N/A N/A N/A N/A 9.317±0.00 N/A
ENST00000546749 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.062±0.00 N/A N/A N/A N/A
ENST00000547682 N/A N/A 3.033±0.00 3.775±0.00 8.397±0.00 10.421±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548355 3.071±0.00 N/A N/A 5.904±0.00 6.606±0.00 14.571±0.00 N/A 12.947±0.00 N/A 4.593±0.00 N/A N/A N/A 18.472±0.00
ENST00000548640 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.355±0.00 N/A N/A N/A
ENST00000549287 N/A N/A N/A N/A 7.276±0.00 N/A 1.445±0.00 N/A 1.544±0.00 N/A N/A N/A N/A N/A
ENST00000549288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.120±0.00 N/A N/A N/A
ENST00000550146 N/A N/A N/A N/A N/A N/A N/A N/A 1.792±0.00 N/A N/A 5.840±0.00 N/A N/A
ENST00000550552 N/A N/A 4.266±0.00 4.493±0.00 4.748±0.00 10.401±0.00 4.800±3.65 2.257±0.00 N/A 1.967±0.00 1.967±1.60 N/A N/A N/A
ENST00000551305 N/A N/A N/A N/A N/A N/A N/A N/A 0.503±0.00 N/A N/A N/A N/A N/A
ENST00000552546 N/A N/A 1.231±0.00 5.615±0.00 6.067±0.00 6.225±0.00 N/A N/A 1.188±0.00 N/A 0.981±0.00 10.059±0.00 N/A N/A
ENST00000552561 N/A N/A N/A N/A N/A 7.423±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.622±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YK CIL_0005YK_0001 CGP 12:47841537-47968878
CIL_0005YL CIL_0005YL_0001 CGP 12:47963569-48004486

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061067 TMEM106C (1 of 2) transmembrane protein 106C protein_coding Danio_rerio
ENSDARG00000087929 TMEM106C (2 of 2) transmembrane protein 106C protein_coding Danio_rerio
ENSMUSG00000052369 Tmem106c transmembrane protein 106C protein_coding Mus_musculus

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