C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: complement factor H-related 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134365 CFHR4 9606 + 1:196850241-196918972 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251424 CFHR4-002 196888082-196918633 protein_coding
  ENST00000367416 CFHR4-003 196888014-196918713 protein_coding
  ENST00000367418 CFHR4-001 196888103-196918428 protein_coding
  ENST00000608469 CFHR4-004 196850241-196918972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverOvaryTestisENST00000367416ENST00000367418ENST00000608469
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Ovary Testis
ENST00000367416 N/A N/A 0.076±0.00 N/A 0.004±0.00 15.099±0.00 8.887±0.00 N/A 0.028±0.00
ENST00000367418 0.027±0.00 0.009±0.00 0.093±0.00 N/A N/A 10.496±10.43 2.695±0.00 N/A N/A
ENST00000608469 0.040±0.00 N/A 0.005±0.00 0.004±0.00 0.005±0.00 10.668±10.63 1.624±0.00 0.004±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M0 CIL_0001M0_0005 CGP 1:196774795-196959210
CIL_0001M0 CIL_0001M0_0009 CGP 1:196819745-196959210
CIL_0001M0 CIL_0001M0_0008 CGP 1:196819757-196918972
CIL_0001M0 CIL_0001M0_0006 CGP 1:196850241-196959226

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005319 TAS lipid transporter activity
GO:0005576 IEA extracellular region
GO:0006869 TAS lipid transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091868 f13b coagulation factor XIII, B polypeptide protein_coding Danio_rerio
ENSDARG00000092786 cfhl5 complement factor H like 5 protein_coding Danio_rerio
ENSDARG00000094496 cfhl4 complement factor H like 4 protein_coding Danio_rerio
ENSMUSG00000026365 Cfh complement component factor h protein_coding Mus_musculus
ENSMUSG00000033898 Cfhr2 complement factor H-related 2 protein_coding Mus_musculus
ENSMUSG00000057037 Cfhr1 complement factor H-related 1 protein_coding Mus_musculus
ENSMUSG00000070594 Gm4788 predicted gene 4788 protein_coding Mus_musculus

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