C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 4788
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000070594 Gm4788 10090 - 1:139697635-139781239 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027612 Gm4788-201 139697635-139781236 protein_coding
  ENSMUST00000111986 Gm4788-202 139697919-139781239 protein_coding
  ENSMUST00000111989 Gm4788-203 139697919-139781239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027612ENSMUST00000111986ENSMUST00000111989
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027612 0.016±0.00 0.072±0.00 0.009±0.01 0.007±0.00 0.050±0.03 0.022±0.00 0.028±0.01 1.986±1.95 0.082±0.04 N/A 0.093±0.03 0.005±0.00 N/A
ENSMUST00000111986 N/A N/A 0.097±0.08 0.011±0.01 0.081±0.00 0.026±0.00 0.020±0.00 1.515±1.35 0.032±0.00 0.010±0.00 0.118±0.00 0.002±0.00 0.017±0.00
ENSMUST00000111989 0.002±0.00 N/A N/A N/A N/A N/A N/A 9.464±9.87 N/A N/A 0.110±0.00 N/A 0.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M0 CIL_0001M0_000C CGP 1:139697635-139858689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091868 f13b coagulation factor XIII, B polypeptide protein_coding Danio_rerio
ENSDARG00000092786 cfhl5 complement factor H like 5 protein_coding Danio_rerio
ENSDARG00000094496 cfhl4 complement factor H like 4 protein_coding Danio_rerio
ENSG00000000971 CFH complement factor H protein_coding Homo_sapiens
ENSG00000080910 CFHR2 complement factor H-related 2 protein_coding Homo_sapiens
ENSG00000116785 CFHR3 complement factor H-related 3 protein_coding Homo_sapiens
ENSG00000134365 CFHR4 complement factor H-related 4 protein_coding Homo_sapiens
ENSG00000134389 CFHR5 complement factor H-related 5 protein_coding Homo_sapiens
ENSG00000244414 CFHR1 complement factor H-related 1 protein_coding Homo_sapiens
ENSG00000276911 CFHR2 complement factor H-related 2 protein_coding Homo_sapiens

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