C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: complement component factor h
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026365 Cfh 10090 - 1:140085855-140183411 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000066859 Cfh-001 140085855-140183411 protein_coding
  ENSMUST00000111976 Cfh-201 140085855-140183411 protein_coding
  ENSMUST00000111977 Cfh-003 140085855-140183317 protein_coding
  ENSMUST00000123238 Cfh-002 140085879-140183322 nonsense_mediated_decay
  ENSMUST00000148225 Cfh-004 140145219-140183411 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000111976ENSMUST00000111977ENSMUST00000123238
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000111976 5.610±3.96 1.958±1.11 25.019±0.33 1.785±0.27 1.693±0.80 0.719±0.46 4.857±1.11 5.993±0.67 9.482±5.24 4.745±0.85 0.308±0.12 4.687±1.49 0.504±0.41 0.148±0.03
ENSMUST00000111977 10.672±5.86 3.183±0.90 13.569±0.49 1.863±1.86 4.586±0.84 0.798±0.40 11.465±0.76 20.607±3.25 37.202±24.71 17.715±0.67 1.012±0.26 66.633±80.40 1.176±1.72 0.600±0.33
ENSMUST00000123238 N/A N/A N/A N/A N/A 0.398±0.20 N/A N/A N/A N/A N/A N/A N/A 0.234±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M0 CIL_0001M0_000B CGP 1:139810293-140183411

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001851 IPI complement component C3b binding
GO:0005576 IEA extracellular region
GO:0006957 IEA complement activation, alternative pathway
GO:0008201 IDA heparin binding
GO:0030449 IMP regulation of complement activation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091868 f13b coagulation factor XIII, B polypeptide protein_coding Danio_rerio
ENSDARG00000092786 cfhl5 complement factor H like 5 protein_coding Danio_rerio
ENSDARG00000094496 cfhl4 complement factor H like 4 protein_coding Danio_rerio
ENSG00000000971 CFH complement factor H protein_coding Homo_sapiens
ENSG00000080910 CFHR2 complement factor H-related 2 protein_coding Homo_sapiens
ENSG00000116785 CFHR3 complement factor H-related 3 protein_coding Homo_sapiens
ENSG00000134365 CFHR4 complement factor H-related 4 protein_coding Homo_sapiens
ENSG00000134389 CFHR5 complement factor H-related 5 protein_coding Homo_sapiens
ENSG00000244414 CFHR1 complement factor H-related 1 protein_coding Homo_sapiens
ENSG00000276911 CFHR2 complement factor H-related 2 protein_coding Homo_sapiens

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