C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuron navigator 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000134369 NAV1 9606 + 1:201622885-201826969 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000367295 NAV1-002 201739868-201826969 protein_coding
  ENST00000367296 NAV1-001 201648249-201826969 protein_coding
  ENST00000367302 NAV1-006 201622927-201823344 protein_coding
  ENST00000430015 NAV1-004 201780523-201803690 protein_coding
  ENST00000438083 NAV1-007 201786440-201808045 protein_coding
  ENST00000469130 NAV1-005 201782630-201798608 processed_transcript
  ENST00000477118 NAV1-008 201786550-201803706 nonsense_mediated_decay
  ENST00000490213 NAV1-003 201739317-201803690 processed_transcript
  ENST00000491403 NAV1-009 201623283-201629540 retained_intron
  ENST00000593583 NAV1-201 201622885-201623610 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000367295ENST00000367296ENST00000367302
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000367295 12.572±0.00 1.908±0.00 N/A 2.623±0.58 4.773±3.58 0.925±0.00 1.777±0.39 2.299±0.00 1.854±0.75 0.635±0.27 1.767±0.62 2.711±0.28 2.153±0.55
ENST00000367296 N/A N/A N/A 2.046±1.16 N/A N/A N/A N/A N/A N/A 0.912±0.00 N/A N/A
ENST00000367302 7.608±0.00 N/A 0.574±0.00 N/A 0.915±0.00 2.247±1.41 2.929±0.00 N/A 2.777±2.06 N/A N/A 3.177±0.83 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LW CIL_0001LW_0002 CGP 1:201483530-201826969

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001578 IEA microtubule bundle formation
GO:0001764 IEA neuron migration
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0015630 IEA microtubule cytoskeleton

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058771 NAV1 (1 of 3) neuron navigator 1 protein_coding Danio_rerio
ENSDARG00000078011 NAV1 (2 of 3) neuron navigator 1 protein_coding Danio_rerio
ENSDARG00000089438 FP236162.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000009418 Nav1 neuron navigator 1 protein_coding Mus_musculus

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