C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: neuron navigator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367296 NAV1-001 ENSG00000134369 9606 + 1:201648249-201826969 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENST00000367296
Transcript ID Brain Ovary
ENST00000367296 2.046±1.16 0.912±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LW CIL_0001LW_0002 CGP 1:201483530-201826969

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001578 IEA microtubule bundle formation
GO:0001764 IEA neuron migration
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0015630 IEA microtubule cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067414 Nav1-001 protein_coding Mus_musculus 0 8026
ENSMUST00000040599 Nav1-201 protein_coding Mus_musculus 0 7851
ENSMUST00000190298 Nav1-002 protein_coding Mus_musculus 0 3762
ENSMUST00000189362 Nav1-003 retained_intron Mus_musculus 0 3173
ENSMUST00000190130 Nav1-004 processed_transcript Mus_musculus 0 3151
ENSMUST00000189252 Nav1-006 protein_coding Mus_musculus 0 835
ENSMUST00000187311 Nav1-007 retained_intron Mus_musculus 0 420
ENSDART00000115403 NAV1 (2 of 3)-201 protein_coding Danio_rerio 0 255
ENSMUST00000190735 Nav1-005 retained_intron Mus_musculus 8e-29 135
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.000005 60
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00002 58

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